30138.m004071 (Ricinus communis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 30138.m004071 T320938_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.796 0.796
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30138.m004071 RWP-RK 146 194

Links

Other RWP-RK family TFs
Other Ricinus communis TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OBART01G14240 Oryza barthii OBART01G14240 N 0.000
OGLUM01G15990 Oryza glumaepatula OGLUM01G15990 N 0.000
ONIVA01G16990 Oryza nivara ONIVA01G16990 N 0.000
OPUNC01G13870 Oryza punctata OPUNC01G13870 N 0.000
ORUFI01G15830 Oryza rufipogon ORUFI01G15830 N 0.000
OS01G0340100 Oryza sativa OS01G0340100 N 0.000