Gorai.008G193400 (Gossypium raimondii)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Gorai.008G193400 T321161_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.776 0.776
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G193400.1 RWP-RK 143 191

Links

Other RWP-RK family TFs
Other Gossypium raimondii TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N 0.000
AAEL009092 Aedes aegypti AAEL009092 N 0.000
Alligator_sinensis_CCG004678.1 Alligator sinensis Alligator_sinensis_CCG004678.1 N 0.000
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N 0.000
AEPI009380 Anopheles epiroticus AEPI009380 N 0.000
AFAF012002 Anopheles farauti AFAF012002 N 0.000
AGAP001761 Anopheles gambiae AGAP001761 N 0.000
AMEM008456 Anopheles merus AMEM008456 N 0.000
Afo_R008528 Aptenodytes forsteri Afo_R008528 N 0.000
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N 0.000
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N 0.000
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N 0.000
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N 0.000
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N 0.000
CLEC001936 Cimex lectularius CLEC001936 N 0.000
lag1-like1 Ciona intestinalis ENSCING00000006059 N 0.000
ENSCSAVG00000009299 Ciona savignyi ENSCSAVG00000009299 N 0.000
KGM_16996 Danaus plexippus KGM_16996 N 0.000
cers4b Danio rerio ENSDARG00000018619 N 0.000
cers3b Danio rerio ENSDARG00000036337 N 0.000
DAPPUDRAFT_220106 Daphnia pulex DAPPUDRAFT_220106 N 0.000
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N 0.000
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N 0.000
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N 0.000
HelroG82517 Helobdella robusta HelroG82517 N 0.000
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N 0.000
LDEC003623 Leptinotarsa decemlineata LDEC003623 N 0.000
LotgiG226091 Lottia gigantea LotgiG226091 N 0.000
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N 0.000
MCINX005367 Melitaea cinxia MCINX005367 N 0.000
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N 0.000
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N 0.000
ENSMODG00000004533 Monodelphis domestica ENSMODG00000004533 N 0.000
ENSMODG00000004916 Monodelphis domestica ENSMODG00000004916 N 0.000
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N 0.000
Ocbimv22016239m.g Octopus bimaculoides Ocbimv22016239m.g N 0.000
Ogr00854 Ophisaurus gracilis Ogr00854 N 0.000
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N 0.000
CERS5 Oryzias latipes ENSORLG00000010219 N 0.000
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N 0.000
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N 0.000
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N 0.000
RPRC008736 Rhodnius prolixus RPRC008736 N 0.000
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N 0.000
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N 0.000
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N 0.000
SINV24013 Solenopsis invicta SINV24013 N 0.000
SINV20227 Solenopsis invicta SINV20227 N 0.000
cers4b Takifugu rubripes ENSTRUG00000000191 N 0.000
CERS5 Takifugu rubripes ENSTRUG00000010435 N 0.000
cers2a Takifugu rubripes ENSTRUG00000012292 N 0.000
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N 0.000
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N 0.000
cers3.L Xenopus laevis XB-GENE-6251639 N 0.000
cers5.S Xenopus laevis XB-GENE-866438 N 0.000
AAL89720 Xenopus laevis AAL89720 N 0.000
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N 0.000
L798_00373 Zootermopsis nevadensis L798_00373 N 0.000