Lus10034456.g (Linum usitatissimum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Lus10034456.g T321184_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.755 0.755
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10034456 RWP-RK 165 213

Links

Other RWP-RK family TFs
Other Linum usitatissimum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.000
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.000
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.000
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.000
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.000
ASU_00971 Ascaris suum ASU_00971 I 0.000
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.000
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.000
BXY_0816300 Bursaphelenchus xylophilus BXY_0816300 I 0.000
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.000
CBN00088 Caenorhabditis brenneri CBN00088 I 0.000
CBN28641 Caenorhabditis brenneri CBN28641 I 0.000
CBN21958 Caenorhabditis brenneri CBN21958 I 0.000
CBN05776 Caenorhabditis brenneri CBN05776 I 0.000
CBN04415 Caenorhabditis brenneri CBN04415 I 0.000
CBN32300 Caenorhabditis brenneri CBN32300 I 0.000
CBG22587 Caenorhabditis briggsae CBG22587 I 0.000
CBG03466 Caenorhabditis briggsae CBG03466 I 0.000
CBG14996 Caenorhabditis briggsae CBG14996 I 0.000
CBG13142 Caenorhabditis briggsae CBG13142 I 0.000
CBG03860 Caenorhabditis briggsae CBG03860 I 0.000
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.000
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.000
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.000
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.000
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.000
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.000
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.000
CJA11132 Caenorhabditis japonica CJA11132 N 0.000
CJA14248 Caenorhabditis japonica CJA14248 I 0.000
CJA14611 Caenorhabditis japonica CJA14611 I 0.000
CJA18307 Caenorhabditis japonica CJA18307 I 0.000
CJA19445 Caenorhabditis japonica CJA19445 I 0.000
CJA39530 Caenorhabditis japonica CJA39530 I 0.000
CJA02727 Caenorhabditis japonica CJA02727 I 0.000
CRE10779 Caenorhabditis remanei CRE10779 I 0.000
CRE07033 Caenorhabditis remanei CRE07033 I 0.000
CRE07034 Caenorhabditis remanei CRE07034 I 0.000
CRE07035 Caenorhabditis remanei CRE07035 I 0.000
CRE08264 Caenorhabditis remanei CRE08264 I 0.000
CRE09416 Caenorhabditis remanei CRE09416 I 0.000
CRE22212 Caenorhabditis remanei CRE22212 I 0.000
CRE26423 Caenorhabditis remanei CRE26423 I 0.000
CRE29874 Caenorhabditis remanei CRE29874 I 0.000
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.000
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.000
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.000
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.000
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.000
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.000
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.000
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.000
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.000
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.000
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.000
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.000
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.000
NECAME_02375 Necator americanus NECAME_02375 I 0.000
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.000
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.000
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.000
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.000
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.000
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.000
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.000
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.000
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.000
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.000
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.000
L889_g16305 Steinernema feltiae L889_g16305 I 0.000
L889_g366 Steinernema feltiae L889_g366 I 0.000
L889_g15424 Steinernema feltiae L889_g15424 I 0.000
L889_g31970 Steinernema feltiae L889_g31970 I 0.000
L889_g2977 Steinernema feltiae L889_g2977 I 0.000
L893_g263 Steinernema glaseri L893_g263 I 0.000
L893_g33656 Steinernema glaseri L893_g33656 I 0.000
L893_g5404 Steinernema glaseri L893_g5404 I 0.000
L893_g6565 Steinernema glaseri L893_g6565 I 0.000
L898_g9613 Steinernema monticolum L898_g9613 I 0.000
L898_g5338 Steinernema monticolum L898_g5338 I 0.000
L898_g32368 Steinernema monticolum L898_g32368 I 0.000
L898_g11608 Steinernema monticolum L898_g11608 I 0.000
L892_g23093 Steinernema scapterisci L892_g23093 I 0.000
L892_g17146 Steinernema scapterisci L892_g17146 I 0.000
L892_g17832 Steinernema scapterisci L892_g17832 I 0.000
L892_g3438 Steinernema scapterisci L892_g3438 I 0.000
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.000
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.000
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.000
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.000
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.000
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.000