MDP0000141137 (Malus domestica)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 MDP0000141137 T321188_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000141137 RWP-RK 145 193

Links

Other RWP-RK family TFs
Other Malus domestica TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.784
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N 0.735
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N 0.714
RKD4 Arabidopsis thaliana AT5G53040 N 0.714
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.714
Bo2g046220 Brassica oleracea Bo2g046220 N 0.735
Bo9g108730 Brassica oleracea Bo9g108730 N 0.776
Bra022622 Brassica rapa Bra022622 N 0.735
Bra003088 Brassica rapa Bra003088 N 0.776
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 0.735
Carubv10028317m.g Capsella rubella Carubv10028317m.g N 0.735
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.837
Ca_03992 Cicer arietinum Ca_03992 N 0.735
Cla004331 Citrullus lanatus Cla004331 N 0.735
Cucsa.032230 Cucumis sativus Cucsa.032230 N 0.714
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.735
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.796
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.755
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.714
GLYMA04G41320 Glycine max GLYMA04G41320 N 0.735
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.837
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.703
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.857
chr1.CM0033.390.nc Lotus japonicus chr1.CM0033.390.nc N 0.755
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N 0.725
MDP0000819497 Malus domestica MDP0000819497 N 0.959
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.776
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.816
mgf025545m Mimulus guttatus mgf025545m N 0.776
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.714
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.714
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.796
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.796
Pm019768 Prunus mume Pm019768 N 0.898
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.918
30024.m001687 Ricinus communis 30024.m001687 N 0.837
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.816
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.796
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.837
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.837
TCM_015430 Theobroma cacao TCM_015430 N 0.878
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.816