MDP0000261199 (Malus domestica)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 MDP0000261199 T321195_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.816 0.816
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000261199 RWP-RK 172 220

Links

Other RWP-RK family TFs
Other Malus domestica TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002645 Ailuropoda melanoleuca ENSAMEG00000002645 I 0.000
ENSAPLG00000011422 Anas platyrhynchos ENSAPLG00000011422 I 0.000
ENSACAG00000005519 Anolis carolinensis ENSACAG00000005519 I 0.000
Afo_R013608 Aptenodytes forsteri Afo_R013608 I 0.000
ENSBTAP00000005489-D1 Bos grunniens ENSBTAP00000005489-D1 I 0.000
VEZF1 Bos taurus ENSBTAG00000004193 I 0.000
Brh_R008815 Buceros rhinoceros Brh_R008815 I 0.000
VEZF1 Callithrix jacchus ENSCJAG00000014022 I 0.000
Aan_R014132 Calypte anna Aan_R014132 I 0.000
VEZF1 Canis familiaris ENSCAFG00000017426 I 0.000
VEZF1 Cavia porcellus ENSCPOG00000002637 I 0.000
ENSCSAG00000005638 Chlorocebus sabaeus ENSCSAG00000005638 I 0.000
VEZF1 Choloepus hoffmanni ENSCHOG00000007280 I 0.000
VEZF1 Dasypus novemcinctus ENSDNOG00000034294 I 0.000
VEZF1 Equus caballus ENSECAG00000016083 I 0.000
VEZF1 Erinaceus europaeus ENSEEUG00000009273 I 0.000
VEZF1 Felis catus ENSFCAG00000004551 I 0.000
ENSFALG00000005040 Ficedula albicollis ENSFALG00000005040 I 0.000
VEZF1 Gallus gallus ENSGALG00000005530 I 0.000
Gfo_R012754 Geospiza fortis Gfo_R012754 I 0.000
VEZF1 Gorilla gorilla ENSGGOG00000004387 I 0.000
VEZF1 Homo sapiens ENSG00000136451 D 0.000
ENSSTOG00000000239 Ictidomys tridecemlineatus ENSSTOG00000000239 I 0.000
VEZF1 Loxodonta africana ENSLAFG00000029087 I 0.000
ENSMMUP00000006278 Macaca fascicularis ENSMMUP00000006278 I 0.000
VEZF1 Macaca mulatta ENSMMUG00000004723 I 0.000
VEZF1 Meleagris gallopavo ENSMGAG00000008207 I 0.000
VEZF1 Microcebus murinus ENSMICG00000016243 I 0.000
VEZF1 Monodelphis domestica ENSMODG00000014778 I 0.000
ENSMPUG00000015370 Mustela putorius furo ENSMPUG00000015370 I 0.000
ENSMUSG00000098546 Mus musculus ENSMUSG00000098546 I 0.000
Vezf1 Mus musculus ENSMUSG00000018377 I 0.000
Myotis_brandtii_VEZF1_10020669 Myotis brandtii Myotis_brandtii_VEZF1_10020669 I 0.000
VEZF1 Myotis lucifugus ENSMLUG00000011019 I 0.000
ENSNLEG00000008084 Nomascus leucogenys ENSNLEG00000008084 I 0.000
VEZF1 Ochotona princeps ENSOPRG00000000899 I 0.000
VEZF1 Ornithorhynchus anatinus ENSOANG00000007321 I 0.000
VEZF1 Oryctolagus cuniculus ENSOCUG00000017673 I 0.000
VEZF1 Otolemur garnettii ENSOGAG00000014483 I 0.000
ENSOARG00000008213 Ovis aries ENSOARG00000008213 I 0.000
VEZF1 Pan troglodytes ENSPTRG00000009442 I 0.000
ENSPANG00000022307 Papio anubis ENSPANG00000022307 I 0.000
VEZF1 Procavia capensis ENSPCAG00000005140 I 0.000
VEZF1 Pteropus vampyrus ENSPVAG00000000518 I 0.000
Vezf1 Rattus norvegicus ENSRNOG00000009819 I 0.000
ENSSHAG00000003506 Sarcophilus harrisii ENSSHAG00000003506 I 0.000
ENSSSCG00000025930 Sus scrofa ENSSSCG00000025930 I 0.000
VEZF1 Sus scrofa ENSSSCG00000017623 I 0.000
ENSTGUG00000015998 Taeniopygia guttata ENSTGUG00000015998 I 0.000
ENSTGUG00000008421 Taeniopygia guttata ENSTGUG00000008421 I 0.000
VEZF1 Tupaia belangeri ENSTBEG00000015173 I 0.000
VEZF1 Tursiops truncatus ENSTTRG00000007309 I 0.000
Tal_R013318 Tyto alba Tal_R013318 I 0.000
vezf1.S Xenopus laevis XB-GENE-481527 I 0.000
vezf1.L Xenopus laevis XB-GENE-6256471 I 0.000
vezf1 Xenopus tropicalis XB-GENE-481523 I 0.000