CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g002317m.g
(
Citrus sinensis
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
orange1.1g002317m.g
T321205_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.898
0.898
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.878
0.878
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g002317m
RWP-RK
620
668
TITLQVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV
orange1.1g002319m
RWP-RK
620
668
TITLQVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV
orange1.1g002322m
RWP-RK
620
668
TITLQVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV
Links
Other
RWP-RK
family TFs
Other
Citrus sinensis
TFs
416 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy