orange1.1g036926m.g (Citrus sinensis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 orange1.1g036926m.g T321208_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.844 0.844
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.844 0.844
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g036926m RWP-RK 1 45

Links

Other RWP-RK family TFs
Other Citrus sinensis TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PISMIDRAFT_103365 Pisolithus microcarpus PISMIDRAFT_103365 N 0.000
PISMIDRAFT_122674 Pisolithus microcarpus PISMIDRAFT_122674 N 0.000
PISMIDRAFT_43706 Pisolithus microcarpus PISMIDRAFT_43706 N 0.000