CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J12413
(
Panicum virgatum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
Pavir.J12413
T321229_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.783
0.783
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J12413.1.p
RWP-RK
500
522
SISLEVLQQYFSGSLKNAAKILG
Links
Other
RWP-RK
family TFs
Other
Panicum virgatum
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy