chr2.CM0904.130.nd (Lotus japonicus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 chr2.CM0904.130.nd T321297_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD

HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.878 0.878
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN

NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0904.130.nd RWP-RK 492 540

Links

Other RWP-RK family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action