PGSC0003DMG400001772 (Solanum tuberosum)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 PGSC0003DMG400001772 T321417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400004439 S1FA 1 32
PGSC0003DMT400004440 S1FA 4 69
PGSC0003DMT400004441 S1FA 15 80

Links

Other S1FA family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action