CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0666s0032
(
Capsella grandiflora
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04689 (S1FA)
IPR006779
Cagra.0666s0032
T321486_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
0.742
0.742
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0666s0032.1.p
S1FA
11
76
AVEAKGLNPGLIVLLVVGGLLVTFLIANYVMYMYAQKNLPPKKKKPISKKKLKREKLKQGVPVPGE
Links
Other
S1FA
family TFs
Other
Capsella grandiflora
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy