Cagra.9801s0004 (Capsella grandiflora)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 Cagra.9801s0004 T321488_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.9801s0004.1.p S1FA 217 256

Links

Other S1FA family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10019872m.g Capsella rubella Carubv10019872m.g N 1.000
Thhalv10018190m.g Eutrema salsugineum Thhalv10018190m.g N 0.975
Bra004229 Brassica rapa Bra004229 N 0.975
Bo6g103870 Brassica oleracea Bo6g103870 N 0.975
Ca_09421 Cicer arietinum Ca_09421 N 0.800
Eucgr.H04654 Eucalyptus grandis Eucgr.H04654 N 0.780
evm.TU.supercontig_43.22 Carica papaya evm.TU.supercontig_43.22 N 0.775
Ciclev10030842m.g Citrus clementina Ciclev10030842m.g N 0.750
orange1.1g005226m.g Citrus sinensis orange1.1g005226m.g N 0.750
POPTR_0010s06830 Populus trichocarpa POPTR_0010s06830 N 0.750
chr1.LjT01D01.120.nd Lotus japonicus chr1.LjT01D01.120.nd N 0.750
GLYMA03G06320 Glycine max GLYMA03G06320 N 0.725
MTR_7g070200 Medicago truncatula MTR_7g070200 N 0.725
mgf019748m Mimulus guttatus mgf019748m N 0.725
PRUPE_ppa002123mg Prunus persica PRUPE_ppa002123mg N 0.725
TCM_010797 Theobroma cacao TCM_010797 N 0.725
cassava14758.m1 Manihot esculenta cassava14758.m1 N 0.725
VIT_01s0010g02910 Vitis vinifera VIT_01s0010g02910 N 0.725
chr3.CM0116.60.nd Lotus japonicus chr3.CM0116.60.nd N 0.700
MDP0000305994 Malus domestica MDP0000305994 N 0.700
PGSC0003DMG400014917 Solanum tuberosum PGSC0003DMG400014917 N 0.700
Ca_04428 Cicer arietinum Ca_04428 N 0.700