MDP0000276000 (Malus domestica)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 MDP0000276000 T321512_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000276000 S1FA 11 76

Links

Other S1FA family TFs
Other Malus domestica TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.864
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.864
Pm002519 Prunus mume Pm002519 N 0.864
MDP0000559232 Malus domestica MDP0000559232 N 0.848
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.833
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.818
TCM_022113 Theobroma cacao TCM_022113 I 0.803
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.803
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.803
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.803
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.788
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.788
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.788
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.788
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.788
Si011030m.g Setaria italica Si011030m.g N 0.788
Cla018556 Citrullus lanatus Cla018556 I 0.788
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.788
mgf000337m Mimulus guttatus mgf000337m I 0.788
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.788
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.788
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.786
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.773
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.773
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.773
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.773
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.773
mgf004062m Mimulus guttatus mgf004062m I 0.773
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.773
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.773
S1FA2 Oryza sativa OS04G0408700 N 0.773
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.773
OBART04G11650 Oryza barthii OBART04G11650 N 0.773
Cla018106 Citrullus lanatus Cla018106 I 0.773
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.773
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.773
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.773
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.773
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.773
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.773
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.773
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.773
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.758
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.758
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.758
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.758
OB04G18780 Oryza brachyantha OB04G18780 I 0.758
OBART04G11660 Oryza barthii OBART04G11660 N 0.758
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.758
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.758
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.758
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.758
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.758
OB04G18770 Oryza brachyantha OB04G18770 I 0.758
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.758
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.758
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.758
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.758
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.758
OS04G0408900 Oryza sativa OS04G0408900 N 0.758
PK08477.1 Cannabis sativa PK08477.1 I 0.742
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.742
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.742
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.742
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.742
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.742
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.742
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.727
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.727
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.727
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.727
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.727
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.712
Bra003132 Brassica rapa Bra003132 I 0.712
Bo6g067310 Brassica oleracea Bo6g067310 I 0.712
S1FA1 Arabidopsis thaliana AT3G53370 I 0.712
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.712
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.712
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I 0.712
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.712
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.712
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.712
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.712
Ca_12027 Cicer arietinum Ca_12027 I 0.712