CpipJ_CPIJ007045 (Culex pipiens)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 CpipJ_CPIJ007045 T321551_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Deaf1
M06445_2.00
Drosophila melanogaster
VMCGAR

YTCGKB
B1H
Zhu et al.(2011)
Deaf1_FlyReg_FBgn0013799
0.875 0.707
Deaf1
M07544_2.00
Drosophila melanogaster
VMCGAR

YTCGKB
DNaseI footprinting
Mathelier et al.(2014)
MA0185.1
0.875 0.707
Deaf1
M11268_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF_01
0.875 0.707
Deaf1
M11269_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF1_Q6
0.875 0.707
DEAF1
M11266_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.864 0.640
DEAF1
M11267_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.864 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007045-RA SAND 207 281

Links

Other SAND family TFs
Other Culex pipiens TFs

Invalid Input OrderBy

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action