ENSAMXG00000001001 (Astyanax mexicanus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSAMXG00000001001 T321613_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY

RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.986 0.787
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN

NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.986 0.773
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH

DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.983 0.840
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN

NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.982 0.840
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN

NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.982 0.773
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN

NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.982 0.773
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.982 0.760
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN

NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.982 0.760
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.982 0.760
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.982 0.760
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.982 0.760
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.981 0.813
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.981 0.813
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.981 0.813
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.981 0.813
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.981 0.813
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.981 0.813
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.981 0.813
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN

NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.958 0.667
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000001028 SAND 80 155

Links

Other SAND family TFs
Other Astyanax mexicanus TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GMEB2 Danio rerio ENSDARG00000093240 I 0.989
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.986
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.986
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.985
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.985
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.985
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.984
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.984
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.984
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.984
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.984
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.984
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.984
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.984
Aan_R015716 Calypte anna Aan_R015716 I 0.984
Tal_R007596 Tyto alba Tal_R007596 I 0.984
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.983
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.983
AAH84751 Xenopus laevis AAH84751 I 0.983
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.983
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.982
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.982
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.982
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.982
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.982
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.982
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.982
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.982
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.982
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.982
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.982
GMEB1 Sorex araneus ENSSARG00000001145 I 0.982
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.982
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.982
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.982
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.982
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.982
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.982
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.982
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.982
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.982
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.982
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.982
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.982
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.982
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.982
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.982
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.982
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.982
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.982
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.982
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.982
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.982
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.982
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.982
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.982
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.982
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.982
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.982
GMEB1 Bos taurus ENSBTAG00000001160 I 0.982
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.982
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.982
GMEB1 Equus caballus ENSECAG00000009764 I 0.982
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.982
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.982
GMEB1 Homo sapiens ENSG00000162419 D 0.982
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.982
Aan_R005833 Calypte anna Aan_R005833 I 0.982
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.982
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.982
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.982
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.982
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.982
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.982
GMEB1 Felis catus ENSFCAG00000018209 I 0.982
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.981
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.981
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.981
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.981
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.981
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.981
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.981
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.981
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.981
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.981
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.981
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.981
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.981
GMEB2 Equus caballus ENSECAG00000019377 I 0.981
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.981
GMEB2 Homo sapiens ENSG00000101216 D 0.981
GMEB2 Felis catus ENSFCAG00000031273 I 0.981
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.981
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.981
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.981
GMEB2 Bos taurus ENSBTAG00000014769 I 0.981
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.981
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.981
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.981
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.981
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.981
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.981
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.980
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.980
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.980
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.977
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.977
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.976
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.970
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.969
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.964
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.958
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.958
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.954
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.954
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.952
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.950
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.950
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.949
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.949
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.946
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.945
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.945
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.945
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.944
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.937
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.935
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.933
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.931
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.931
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.929
gmeb1 Danio rerio ENSDARG00000062060 I 0.921
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.917
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.917
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.917
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.903
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.903
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.898