gmeb1 (Gasterosteus aculeatus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSGACG00000007791 T321719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.954 0.747
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN

NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.954 0.747
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN

NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.954 0.747
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN

NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.954 0.747
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.954 0.747
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.954 0.747
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.954 0.747
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY

RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.947 0.733
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN

NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.947 0.720
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN

NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.934 0.720
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.928 0.693
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.928 0.693
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.928 0.693
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.928 0.693
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.928 0.693
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.928 0.693
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.928 0.693
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH

DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.925 0.693
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN

NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.852 0.560
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000010331 SAND 71 149

Links

Other SAND family TFs
Other Gasterosteus aculeatus TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.992
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.991
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.991
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.990
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.988
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.986
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.984
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.977
gmeb1 Danio rerio ENSDARG00000062060 I 0.972
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.970
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.960
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.958
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.957
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.957
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.956
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.955
Aan_R005833 Calypte anna Aan_R005833 I 0.955
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.954
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.954
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.954
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.954
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.954
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.954
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.954
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.954
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.954
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.954
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.954
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.954
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.954
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.954
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.954
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.954
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.954
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.954
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.954
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.954
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.954
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.954
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.954
GMEB1 Bos taurus ENSBTAG00000001160 I 0.954
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.954
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.954
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.954
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.954
GMEB1 Sorex araneus ENSSARG00000001145 I 0.954
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.954
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.954
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.954
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.954
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.954
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.954
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.954
GMEB1 Homo sapiens ENSG00000162419 D 0.954
GMEB1 Felis catus ENSFCAG00000018209 I 0.954
GMEB1 Equus caballus ENSECAG00000009764 I 0.954
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.954
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.954
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.954
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.954
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.954
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.952
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.952
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.950
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.947
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.947
AAH84751 Xenopus laevis AAH84751 I 0.945
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.940
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.940
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.938
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.936
Tal_R007596 Tyto alba Tal_R007596 I 0.935
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.935
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.935
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.935
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.935
Aan_R015716 Calypte anna Aan_R015716 I 0.935
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.935
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.934
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.934
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.933
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.933
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.929
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.929
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.928
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.928
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.928
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.928
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.928
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.928
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.928
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.928
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.928
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.928
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.928
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.928
GMEB2 Felis catus ENSFCAG00000031273 I 0.928
GMEB2 Equus caballus ENSECAG00000019377 I 0.928
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.928
GMEB2 Homo sapiens ENSG00000101216 D 0.928
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.928
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.928
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.928
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.928
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.928
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.928
GMEB2 Bos taurus ENSBTAG00000014769 I 0.928
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.928
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.928
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.928
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.928
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.926
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.925
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.924
GMEB2 Danio rerio ENSDARG00000093240 I 0.923
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.920
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.919
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.915
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.912
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.912
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.904
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.903
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.901
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.900
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.892
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.876
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.875
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.872
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.868
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.867
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.864
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.852
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.852
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.844