ENSGALG00000027470 (Gallus gallus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSGALG00000027470 T321725_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH

DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.994 0.987
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.992 0.947
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.992 0.947
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.992 0.947
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.992 0.947
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.992 0.947
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.992 0.947
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.992 0.947
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN

NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.992 0.960
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN

NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.988 0.787
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN

NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.988 0.787
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.988 0.773
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN

NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.988 0.773
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.988 0.773
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.988 0.773
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.988 0.773
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY

RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.984 0.747
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN

NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.984 0.733
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN

NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.959 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000042139 SAND 87 162

Links

Other SAND family TFs
Other Gallus gallus TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CGI_10026910 Crassostrea gigas CGI_10026910 N 0.000
NEMVEDRAFT_v1g95177 Nematostella vectensis NEMVEDRAFT_v1g95177 N 0.000
LotgiG97849 Lottia gigantea LotgiG97849 N 0.000
ENSXMAG00000013848 Xiphophorus maculatus ENSXMAG00000013848 N 0.000
ENSXMAG00000004642 Xiphophorus maculatus ENSXMAG00000004642 N 0.000
glis2b Takifugu rubripes ENSTRUG00000006205 N 0.000
ENSPFOG00000011330 Poecilia formosa ENSPFOG00000011330 N 0.000
ENSPFOG00000009286 Poecilia formosa ENSPFOG00000009286 N 0.000
glis2b Oryzias latipes ENSORLG00000008275 N 0.000
ENSONIG00000005197 Oreochromis niloticus ENSONIG00000005197 N 0.000
ENSLOCG00000002612 Lepisosteus oculatus ENSLOCG00000002612 N 0.000
ENSGMOG00000014914 Gadus morhua ENSGMOG00000014914 N 0.000
glis2b Gasterosteus aculeatus ENSGACG00000011323 N 0.000
glis2b Danio rerio ENSDARG00000100232 N 0.000
ENSAMXG00000018801 Astyanax mexicanus ENSAMXG00000018801 N 0.000
glis2.S Xenopus laevis XB-GENE-6251812 N 0.000