GMEB2 (Loxodonta africana)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSLAFG00000012335 T321749_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.993 0.987
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.993 0.987
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.993 0.987
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.993 0.987
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.993 0.987
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.993 0.987
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.993 0.987
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.990 0.933
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.990 0.920
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.983 0.733
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.983 0.733
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.983 0.720
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.983 0.720
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.983 0.720
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.983 0.720
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.983 0.720
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.977 0.693
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.977 0.680
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.956 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000010315 SAND 87 162
ENSLAFP00000022237 SAND 88 163

Links

Other SAND family TFs
Other Loxodonta africana TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.993
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.993
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.993
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.993
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.993
GMEB2 Equus caballus ENSECAG00000019377 I 0.993
GMEB2 Felis catus ENSFCAG00000031273 I 0.993
GMEB2 Homo sapiens ENSG00000101216 D 0.993
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.993
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.993
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.993
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.993
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.993
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.993
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.993
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.993
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.993
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.993
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.993
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.993
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.993
GMEB2 Bos taurus ENSBTAG00000014769 I 0.993
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.993
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.993
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.993
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.993
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.992
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.992
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.992
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.991
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.991
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.991
Aan_R015716 Calypte anna Aan_R015716 I 0.991
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.991
Tal_R007596 Tyto alba Tal_R007596 I 0.991
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.991
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.991
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.990
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.990
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.990
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.990
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.990
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.990
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.990
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.989
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.988
AAH84751 Xenopus laevis AAH84751 I 0.987
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.986
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.986
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.985
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.984
Aan_R005833 Calypte anna Aan_R005833 I 0.984
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.984
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.983
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.983
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.983
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.983
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.983
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.983
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.983
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.983
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.983
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.983
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.983
GMEB1 Sorex araneus ENSSARG00000001145 I 0.983
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.983
GMEB1 Homo sapiens ENSG00000162419 D 0.983
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.983
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.983
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.983
GMEB1 Equus caballus ENSECAG00000009764 I 0.983
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.983
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.983
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.983
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.983
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.983
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.983
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.983
GMEB1 Felis catus ENSFCAG00000018209 I 0.983
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.983
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.983
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.983
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.983
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.983
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.983
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.983
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.983
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.983
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.983
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.983
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.983
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.983
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.983
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.983
GMEB1 Bos taurus ENSBTAG00000001160 I 0.983
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.983
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.983
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.983
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.982
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.981
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.980
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.979
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.979
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.979
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.979
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.979
GMEB2 Danio rerio ENSDARG00000093240 I 0.977
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.977
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.977
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.977
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.977
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.977
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.976
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.976
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.972
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.966
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.962
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.961
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.960
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.958
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.958
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.958
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.957
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.956
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.956
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.952
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.951
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.949
gmeb1 Danio rerio ENSDARG00000062060 I 0.942
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.940
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.940
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.938
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.933
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.928
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.928
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.928
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.920
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.915