GMEB2 (Meleagris gallopavo)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSMGAG00000006922 T321765_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH

DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.992 0.933
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.992 0.933
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.992 0.933
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.992 0.933
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.992 0.933
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.992 0.933
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.992 0.933
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN

NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.991 0.947
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN

NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.988 0.773
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN

NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.988 0.773
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.988 0.760
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN

NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.988 0.760
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.988 0.760
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.988 0.760
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.988 0.760
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY

RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.984 0.747
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN

NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.984 0.733
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN

NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.959 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02462_2.00 SAND 57 132

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000007001 SAND 88 163

Links

Other SAND family TFs
Other Meleagris gallopavo TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.994
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.994
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.993
Aan_R015716 Calypte anna Aan_R015716 I 0.993
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.993
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.993
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.993
Tal_R007596 Tyto alba Tal_R007596 I 0.993
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.992
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.992
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.992
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.992
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.992
GMEB2 Felis catus ENSFCAG00000031273 I 0.992
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.992
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.992
GMEB2 Homo sapiens ENSG00000101216 D 0.992
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.992
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.992
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.992
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.992
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.992
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.992
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.992
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.992
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.992
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.992
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.992
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.992
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.992
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.992
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.992
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.992
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.992
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.992
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.992
GMEB2 Equus caballus ENSECAG00000019377 I 0.992
GMEB2 Bos taurus ENSBTAG00000014769 I 0.992
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.991
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.991
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.991
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.991
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.991
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.990
AAH84751 Xenopus laevis AAH84751 I 0.990
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.990
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.990
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.990
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.988
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.988
GMEB1 Sorex araneus ENSSARG00000001145 I 0.988
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.988
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.988
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.988
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.988
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.988
GMEB1 Bos taurus ENSBTAG00000001160 I 0.988
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.988
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.988
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.988
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.988
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.988
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.988
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.988
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.988
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.988
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.988
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.988
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.988
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.988
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.988
Aan_R005833 Calypte anna Aan_R005833 I 0.988
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.988
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.988
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.988
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.988
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.988
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.988
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.988
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.988
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.988
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.988
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.988
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.988
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.988
GMEB1 Homo sapiens ENSG00000162419 D 0.988
GMEB1 Felis catus ENSFCAG00000018209 I 0.988
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.988
GMEB1 Equus caballus ENSECAG00000009764 I 0.988
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.988
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.988
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.988
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.988
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.988
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.988
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.988
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.988
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.984
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.984
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.983
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.983
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.982
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.979
GMEB2 Danio rerio ENSDARG00000093240 I 0.979
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.979
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.978
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.978
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.977
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.977
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.977
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.977
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.975
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.974
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.973
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.971
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.971
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.970
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.969
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.968
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.962
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.960
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.960
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.959
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.959
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.959
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.950
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.949
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.947
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.947
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.947
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.946
gmeb1 Danio rerio ENSDARG00000062060 I 0.940
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.937
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.937
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.937
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.926
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.925
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.921
GMEB1 Macaca mulatta ENSMMUG00000011390 I 0.868