CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gmeb2
(
Mus musculus
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSMUSG00000038705
T321800_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN
NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM
KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.994
1.000
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.994
1.000
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.994
1.000
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM
KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.994
1.000
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.994
1.000
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.994
1.000
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN
NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.992
0.947
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH
DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.992
0.933
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN
NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.986
0.747
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN
NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.986
0.747
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN
NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.986
0.733
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN
NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.986
0.733
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN
NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.986
0.733
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.986
0.733
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.986
0.733
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY
RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.981
0.707
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.981
0.693
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN
NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.956
0.627
For this family, TFs with SR scores >
0.843
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00824_2.00
SAND
22
97
EAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGEL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000037075
SAND
87
162
EAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGEL
ENSMUSP00000116479
SAND
87
162
EAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGEL
ENSMUSP00000116854
SAND
87
126
EAEIVYPITCGDSRANLIWRKFVCPGINVKCVQVRVSMMN
Links
Other
SAND
family TFs
Other
Mus musculus
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GMEB2
Myotis lucifugus
ENSMLUG00000014606
I
0.994
ENSMMUG00000006168
Macaca mulatta
ENSMMUG00000006168
I
0.994
ENSMPUG00000008374
Mustela putorius furo
ENSMPUG00000008374
I
0.994
GMEB2
Gorilla gorilla
ENSGGOG00000008653
I
0.994
GMEB2
Homo sapiens
ENSG00000101216
D
0.994
GMEB2
Dasypus novemcinctus
ENSDNOG00000041843
I
0.994
GMEB2
Equus caballus
ENSECAG00000019377
I
0.994
GMEB2
Felis catus
ENSFCAG00000031273
I
0.994
ENSNLEG00000010094
Nomascus leucogenys
ENSNLEG00000010094
I
0.994
GMEB2
Oryctolagus cuniculus
ENSOCUG00000025815
I
0.994
ENSSTOG00000023031
Ictidomys tridecemlineatus
ENSSTOG00000023031
I
0.994
ENSP00000266068-D1
Bos grunniens
ENSP00000266068-D1
I
0.994
Myotis_brandtii_GMEB2_10023457
Myotis brandtii
Myotis_brandtii_GMEB2_10023457
I
0.994
Gmeb2
Rattus norvegicus
ENSRNOG00000013339
I
0.994
GMEB2
Pan troglodytes
ENSPTRG00000013744
I
0.994
GMEB2
Otolemur garnettii
ENSOGAG00000008826
I
0.994
ENSPANG00000024129
Papio anubis
ENSPANG00000024129
I
0.994
ENSPPYG00000011242
Pongo abelii
ENSPPYG00000011242
I
0.994
ENSCSAG00000016428
Chlorocebus sabaeus
ENSCSAG00000016428
I
0.994
ENSOARG00000010596
Ovis aries
ENSOARG00000010596
I
0.994
GMEB2
Cavia porcellus
ENSCPOG00000025567
I
0.994
GMEB2
Bos taurus
ENSBTAG00000014769
I
0.994
ENSAMEG00000001647
Ailuropoda melanoleuca
ENSAMEG00000001647
I
0.994
GMEB2
Canis familiaris
ENSCAFG00000013008
I
0.994
GMEB2
Callithrix jacchus
ENSCJAG00000010283
I
0.994
GMEB2
Pteropus vampyrus
ENSPVAG00000013473
I
0.993
ENSSHAG00000018066
Sarcophilus harrisii
ENSSHAG00000018066
I
0.993
Cmyd_10009585
Chelonia mydas
Cmyd_10009585
I
0.993
ENSPSIG00000013495
Pelodiscus sinensis
ENSPSIG00000013495
I
0.993
GMEB2
Monodelphis domestica
ENSMODG00000016974
I
0.993
GMEB2
Loxodonta africana
ENSLAFG00000012335
I
0.993
GMEB2
Ornithorhynchus anatinus
ENSOANG00000004939
I
0.992
ENSGALG00000027470
Gallus gallus
ENSGALG00000027470
I
0.992
GMEB2
Taeniopygia guttata
ENSTGUG00000006996
I
0.992
GMEB2
Meleagris gallopavo
ENSMGAG00000006922
D
0.992
Aan_R015716
Calypte anna
Aan_R015716
I
0.992
GMEB2
Anolis carolinensis
ENSACAG00000011613
D
0.992
Gfo_R005287
Geospiza fortis
Gfo_R005287
I
0.992
Pvit_01323
Pogona vitticeps
Pvit_01323
I
0.992
Tal_R007596
Tyto alba
Tal_R007596
I
0.992
ENSFALG00000005856
Ficedula albicollis
ENSFALG00000005856
I
0.992
Brh_R002176
Buceros rhinoceros
Brh_R002176
I
0.992
Afo_R010444
Aptenodytes forsteri
Afo_R010444
I
0.992
ENSLOCG00000001741
Lepisosteus oculatus
ENSLOCG00000001741
I
0.991
ENSAPLG00000010816
Anas platyrhynchos
ENSAPLG00000010816
I
0.991
GMEB2
Tursiops truncatus
ENSTTRG00000012168
I
0.990
GMEB2
Vicugna pacos
ENSVPAG00000000123
I
0.990
Alligator_sinensis_CCG018614.2
Alligator sinensis
Alligator_sinensis_CCG018614.2
I
0.990
AAH84751
Xenopus laevis
AAH84751
I
0.989
ENSETEG00000013534
Echinops telfairi
ENSETEG00000013534
N
0.989
ENSTSYG00000001345
Tarsius syrichta
ENSTSYG00000001345
N
0.989
gmeb2.S
Xenopus laevis
XB-GENE-5755500
I
0.988
GMEB1
Procavia capensis
ENSPCAG00000005575
I
0.987
ENSLACG00000011757
Latimeria chalumnae
ENSLACG00000011757
I
0.987
GMEB1
Pteropus vampyrus
ENSPVAG00000017223
D
0.986
Gmeb1
Rattus norvegicus
ENSRNOG00000010910
I
0.986
ENSAMEG00000011405
Ailuropoda melanoleuca
ENSAMEG00000011405
I
0.986
ENSSHAG00000009099
Sarcophilus harrisii
ENSSHAG00000009099
I
0.986
GMEB1
Sorex araneus
ENSSARG00000001145
I
0.986
ENSP00000381890
Macaca fascicularis
ENSP00000381890
I
0.986
ENSPSIG00000016715
Pelodiscus sinensis
ENSPSIG00000016715
I
0.986
GMEB1
Homo sapiens
ENSG00000162419
D
0.986
Myotis_brandtii_GMEB1_10029602
Myotis brandtii
Myotis_brandtii_GMEB1_10029602
I
0.986
ENSPPYG00000001635
Pongo abelii
ENSPPYG00000001635
I
0.986
Gfo_R008934
Geospiza fortis
Gfo_R008934
I
0.986
GMEB1
Equus caballus
ENSECAG00000009764
I
0.986
GMEB1
Pan troglodytes
ENSPTRG00000000438
I
0.986
GMEB1
Meleagris gallopavo
ENSMGAG00000001716
D
0.986
GMEB1
Felis catus
ENSFCAG00000018209
I
0.986
ENSGALG00000000981
Gallus gallus
ENSGALG00000000981
I
0.986
ENSCPOG00000013402
Cavia porcellus
ENSCPOG00000013402
I
0.986
GMEB1
Tursiops truncatus
ENSTTRG00000013602
I
0.986
GMEB1
Vicugna pacos
ENSVPAG00000006781
I
0.986
Aan_R005833
Calypte anna
Aan_R005833
I
0.986
ENSFALG00000001378
Ficedula albicollis
ENSFALG00000001378
I
0.986
Brh_R012802
Buceros rhinoceros
Brh_R012802
I
0.986
GMEB1
Taeniopygia guttata
ENSTGUG00000000731
I
0.986
GMEB1
Gorilla gorilla
ENSGGOG00000009221
I
0.986
GMEB1
Callithrix jacchus
ENSCJAG00000009754
I
0.986
ENSP00000294409-D1
Bos grunniens
ENSP00000294409-D1
I
0.986
Cmyd_10009780
Chelonia mydas
Cmyd_10009780
I
0.986
Afo_R008896
Aptenodytes forsteri
Afo_R008896
I
0.986
ENSACAG00000010878
Anolis carolinensis
ENSACAG00000010878
I
0.986
GMEB1
Loxodonta africana
ENSLAFG00000011849
I
0.986
ENSNLEG00000009837
Nomascus leucogenys
ENSNLEG00000009837
I
0.986
Ogr01986
Ophisaurus gracilis
Ogr01986
I
0.986
GMEB1
Ornithorhynchus anatinus
ENSOANG00000006127
I
0.986
Gmeb1
Mus musculus
ENSMUSG00000028901
D
0.986
ENSMPUG00000015503
Mustela putorius furo
ENSMPUG00000015503
I
0.986
GMEB1
Myotis lucifugus
ENSMLUG00000012602
I
0.986
ENSMEUG00000004906
Macropus eugenii
ENSMEUG00000004906
I
0.986
ENSMODG00000010947
Monodelphis domestica
ENSMODG00000010947
D
0.986
GMEB1
Canis familiaris
ENSCAFG00000011711
I
0.986
ENSOARG00000002809
Ovis aries
ENSOARG00000002809
I
0.986
GMEB1
Bos taurus
ENSBTAG00000001160
I
0.986
Pvit_15570
Pogona vitticeps
Pvit_15570
I
0.986
ENSCSAG00000001017
Chlorocebus sabaeus
ENSCSAG00000001017
I
0.986
ENSPANG00000018743
Papio anubis
ENSPANG00000018743
I
0.986
GMEB1
Dasypus novemcinctus
ENSDNOG00000025258
I
0.986
GMEB1
Oryctolagus cuniculus
ENSOCUG00000010893
I
0.986
ENSAPLG00000002955
Anas platyrhynchos
ENSAPLG00000002955
I
0.986
Alligator_sinensis_CCG020726.1
Alligator sinensis
Alligator_sinensis_CCG020726.1
I
0.985
ENSLACG00000007355
Latimeria chalumnae
ENSLACG00000007355
I
0.984
Ogr06841
Ophisaurus gracilis
Ogr06841
I
0.983
GMEB2
Procavia capensis
ENSPCAG00000000522
I
0.983
GMEB2
Microcebus murinus
ENSMICG00000010614
I
0.982
ENSMMUP00000008108
Macaca fascicularis
ENSMMUP00000008108
I
0.982
GMEB2
Erinaceus europaeus
ENSEEUG00000001478
I
0.982
ENSMEUG00000008516
Macropus eugenii
ENSMEUG00000008516
I
0.981
ENSAMXG00000001001
Astyanax mexicanus
ENSAMXG00000001001
I
0.981
gmeb1.S
Xenopus laevis
XB-GENE-1002174
D
0.981
gmeb1
Xenopus tropicalis
XB-GENE-1002169
D
0.981
GMEB2
Danio rerio
ENSDARG00000093240
I
0.980
ENSONIG00000017972
Oreochromis niloticus
ENSONIG00000017972
I
0.979
ENSLOCG00000003512
Lepisosteus oculatus
ENSLOCG00000003512
I
0.976
ENSPFOG00000017553
Poecilia formosa
ENSPFOG00000017553
I
0.975
ENSXMAG00000012852
Xiphophorus maculatus
ENSXMAG00000012852
I
0.975
si:ch73-302a13.2
Gasterosteus aculeatus
ENSGACG00000003620
I
0.973
ENSGMOG00000000899
Gadus morhua
ENSGMOG00000000899
I
0.972
si:ch73-302a13.2
Tetraodon nigroviridis
ENSTNIG00000002528
I
0.971
gmeb2
Xenopus tropicalis
XB-GENE-5755487
I
0.969
si:ch73-302a13.2
Takifugu rubripes
ENSTRUG00000012194
I
0.966
ENSTSYG00000002782
Tarsius syrichta
ENSTSYG00000002782
I
0.965
GMEB1
Echinops telfairi
ENSETEG00000000775
I
0.965
ENSTRUG00000014439
Takifugu rubripes
ENSTRUG00000014439
I
0.961
ENSTNIG00000009672
Tetraodon nigroviridis
ENSTNIG00000009672
I
0.960
ENSPFOG00000002327
Poecilia formosa
ENSPFOG00000002327
I
0.958
ENSAMXG00000001956
Astyanax mexicanus
ENSAMXG00000001956
I
0.957
ENSCING00000003435
Ciona intestinalis
ENSCING00000003435
D
0.956
ENSCSAVG00000000320
Ciona savignyi
ENSCSAVG00000000320
I
0.956
ENSAMXG00000015681
Astyanax mexicanus
ENSAMXG00000015681
I
0.952
ENSGMOG00000014002
Gadus morhua
ENSGMOG00000014002
I
0.951
ENSXMAG00000012875
Xiphophorus maculatus
ENSXMAG00000012875
I
0.949
ENSPFOG00000004759
Poecilia formosa
ENSPFOG00000004759
I
0.949
ENSORLG00000020761
Oryzias latipes
ENSORLG00000020761
I
0.949
gmeb1
Oryzias latipes
ENSORLG00000008294
I
0.948
gmeb1
Danio rerio
ENSDARG00000062060
I
0.942
GMEB1
Takifugu rubripes
ENSTRUG00000011964
I
0.939
ENSONIG00000007575
Oreochromis niloticus
ENSONIG00000007575
I
0.939
gmeb1
Tetraodon nigroviridis
ENSTNIG00000003832
I
0.939
ENSGMOG00000013494
Gadus morhua
ENSGMOG00000013494
I
0.933
gmeb1
Gasterosteus aculeatus
ENSGACG00000007791
I
0.928
ENSTNIG00000008152
Tetraodon nigroviridis
ENSTNIG00000008152
I
0.920
CJA34183
Caenorhabditis japonica
CJA34183
N
0.862
GMEB1
Macaca mulatta
ENSMMUG00000011390
I
0.852