GMEB1 (Procavia capensis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSPCAG00000005575 T321858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.306 1.000
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.306 1.000
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.306 1.000
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.306 1.000
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000005204 SAND 89 128

Links

Other SAND family TFs
Other Procavia capensis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CJA34183 Caenorhabditis japonica CJA34183 N 0.908
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.306
ENSCHOG00000008416 Choloepus hoffmanni ENSCHOG00000008416 N 0.863
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.306
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.306
ENSETEG00000013534 Echinops telfairi ENSETEG00000013534 N 0.990
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.306
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.306
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.306
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.306
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.306
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.306
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.306
ENSSARG00000003300 Sorex araneus ENSSARG00000003300 N 0.873
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.306
ENSTSYG00000001345 Tarsius syrichta ENSTSYG00000001345 N 0.990
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.566
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.306
GMEB1 Sorex araneus ENSSARG00000001145 I 0.306
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.306
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.306
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.306
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.306
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.306
GMEB1 Bos taurus ENSBTAG00000001160 I 0.306
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.306
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.306
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.306
GMEB1 Equus caballus ENSECAG00000009764 I 0.306
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.566
GMEB1 Felis catus ENSFCAG00000018209 I 0.306
GMEB1 Homo sapiens ENSG00000162419 D 0.306
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.306
GMEB1 Macaca mulatta ENSMMUG00000011390 I 0.306
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.306
GMEB2 Tursiops truncatus ENSTTRG00000012168 I 0.992
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.987
GMEB2 Vicugna pacos ENSVPAG00000000123 I 0.992
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.306
SP100 Tursiops truncatus ENSTTRG00000014242 N 0.848
SP140 Callithrix jacchus ENSCJAG00000013289 N 0.844