GMEB2 (Tursiops truncatus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSTTRG00000012168 T321945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.306 1.000
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.306 1.000
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.306 1.000
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.306 1.000
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.306 1.000
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.306 1.000
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.306 1.000
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000011545 SAND 87 125

Links

Other SAND family TFs
Other Tursiops truncatus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I 0.000
Alligator_sinensis_CCG020380.1 Alligator sinensis Alligator_sinensis_CCG020380.1 I 0.000
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I 0.000
Afo_R001760 Aptenodytes forsteri Afo_R001760 I 0.000
ENSAMXG00000026090 Astyanax mexicanus ENSAMXG00000026090 N 0.000
ENSP00000281047-D1 Bos grunniens ENSP00000281047-D1 I 0.000
MSGN1 Bos taurus ENSBTAG00000039113 I 0.000
Brh_R011720 Buceros rhinoceros Brh_R011720 I 0.000
MSGN1 Callithrix jacchus ENSCJAG00000032633 I 0.000
Aan_R015364 Calypte anna Aan_R015364 I 0.000
MSGN1 Canis familiaris ENSCAFG00000003750 I 0.000
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I 0.000
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I 0.000
Msgn1 Dipodomys ordii ENSDORG00000003509 I 0.000
MSGN1 Equus caballus ENSECAG00000002724 I 0.000
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I 0.000
MSGN1 Felis catus ENSFCAG00000013583 I 0.000
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I 0.000
msgn1 Gasterosteus aculeatus ENSGACG00000008865 N 0.000
msgn1 Gasterosteus aculeatus ENSGACG00000008864 N 0.000
Gfo_R015241 Geospiza fortis Gfo_R015241 I 0.000
MSGN1 Gorilla gorilla ENSGGOG00000012168 I 0.000
MSGN1 Homo sapiens ENSG00000151379 D 0.000
ENSSTOG00000013981 Ictidomys tridecemlineatus ENSSTOG00000013981 I 0.000
MSGN1 Loxodonta africana ENSLAFG00000015319 I 0.000
ENSP00000281047 Macaca fascicularis ENSP00000281047 I 0.000
MSGN1 Macaca mulatta ENSMMUG00000008141 I 0.000
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I 0.000
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I 0.000
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I 0.000
MSGN1 Monodelphis domestica ENSMODG00000004056 I 0.000
ENSMPUG00000019484 Mustela putorius furo ENSMPUG00000019484 I 0.000
Msgn1 Mus musculus ENSMUSG00000047002 D 0.000
Myotis_brandtii_MSGN1_10020188 Myotis brandtii Myotis_brandtii_MSGN1_10020188 I 0.000
MSGN1 Myotis lucifugus ENSMLUG00000007599 I 0.000
ENSNLEG00000018810 Nomascus leucogenys ENSNLEG00000018810 I 0.000
Ogr03919 Ophisaurus gracilis Ogr03919 I 0.000
ENSONIG00000013311 Oreochromis niloticus ENSONIG00000013311 N 0.000
MSGN1 Ornithorhynchus anatinus ENSOANG00000002188 I 0.000
MSGN1 Oryctolagus cuniculus ENSOCUG00000000309 I 0.000
msgn1 Oryzias latipes ENSORLG00000014828 N 0.000
MSGN1 Otolemur garnettii ENSOGAG00000012569 I 0.000
ENSOARG00000016765 Ovis aries ENSOARG00000016765 I 0.000
MSGN1 Pan troglodytes ENSPTRG00000011679 I 0.000
ENSPANG00000004064 Papio anubis ENSPANG00000004064 I 0.000
ENSPFOG00000020615 Poecilia formosa ENSPFOG00000020615 N 0.000
ENSPPYG00000012628 Pongo abelii ENSPPYG00000012628 I 0.000
MSGN1 Procavia capensis ENSPCAG00000015116 I 0.000
MSGN1 Pteropus vampyrus ENSPVAG00000015666 I 0.000
Msgn1 Rattus norvegicus ENSRNOG00000028518 I 0.000
MSGN1 Sorex araneus ENSSARG00000007866 I 0.000
MSGN1 Sus scrofa ENSSSCG00000026538 I 0.000
MSGN1 Taeniopygia guttata ENSTGUG00000013122 I 0.000
msgn1 Takifugu rubripes ENSTRUG00000008888 N 0.000
ENSTSYG00000003733 Tarsius syrichta ENSTSYG00000003733 I 0.000
msgn1 Tetraodon nigroviridis ENSTNIG00000001511 N 0.000
MSGN1 Tupaia belangeri ENSTBEG00000001387 I 0.000
MSGN1 Tursiops truncatus ENSTTRG00000015917 I 0.000
Tal_R008386 Tyto alba Tal_R008386 I 0.000
ENSXMAG00000020371 Xiphophorus maculatus ENSXMAG00000020371 N 0.000