CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GMEB2 *(Vicugna pacos)* SAND
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF01342 (SAND)	IPR000770	ENSVPAG00000000123	T321949_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Gmeb2 M00824_2.00	Mus musculus	NNACGYNN	NNRCGTNN	PBM Weirauch et al.(2013) pTH3084	0.306	1.000
GMEB2 M03471_2.00	Homo sapiens	YBACGYAM	KTRCGTVR	SELEX Jolma et al.(2013) GMEB2_1	0.306	1.000
GMEB2 M03472_2.00	Homo sapiens	WACGTGSTYACGYW	WRCGTRASCACGTW	SELEX Jolma et al.(2013) GMEB2_2	0.306	1.000
GMEB2 M03473_2.00	Homo sapiens	YACGTAACBBACGYA	TRCGTVVGTTACGTR	SELEX Jolma et al.(2013) GMEB2_3	0.306	1.000
GMEB2 M03474_2.00	Homo sapiens	BKACGTAM	KTACGTMV	SELEX Jolma et al.(2013) GMEB2_4	0.306	1.000
GMEB2 M05735_2.00	Homo sapiens	BYACGTAVSBTACGTRV	BYACGTAVSBTACGTRV	SELEX Yin et al.(2017) GMEB2_eDBD_HT-SELEX	0.306	1.000
GMEB2 M05736_2.00	Homo sapiens	BBACGYAMVBNACGYVV	BBRCGTNVBKTRCGTVV	SELEX Yin et al.(2017) GMEB2_eDBD_Methyl-HT-SELEX	0.306	1.000
For this family, TFs with SR scores > 0.843* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSVPAP00000000114	SAND	87	125	EAEIVYPITCGDSRANLIWRKFVCPGINVKCVQXXXXXX

Links
Other SAND family TFs
Other *Vicugna pacos* TFs