CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s17180
(
Populus trichocarpa
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
POPTR_0002s17180
T322066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s17180.1
SAND
514
584
PLDKVTVICNGMEGTYFPKLHLIECHCSSCGSRKQAPSEWEKHTGCRSKKWKHSVKIKDTMLPLAQWIAEY
Links
Other
SAND
family TFs
Other
Populus trichocarpa
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0190s0220
Salix purpurea
SapurV1A.0190s0220
N
0.985
Bostr.13158s0178
Boechera stricta
Bostr.13158s0178
N
0.867
scaffold_503436.1
Arabidopsis lyrata
scaffold_503436.1
N
0.867