CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATX4
(
Arabidopsis lyrata
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
scaffold_701476.1
T322077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_701476.1
SAND
475
546
VLPDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKKKALSEWERHTGSKSKNWKTSVKVKSSMLALEDWMMKL
Links
Other
SAND
family TFs
Other
Arabidopsis lyrata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla004317
Citrullus lanatus
Cla004317
N
0.951
Cucsa.032070
Cucumis sativus
Cucsa.032070
N
0.950
Solyc03g083410.2
Solanum lycopersicum
Solyc03g083410.2
N
0.950
PGSC0003DMG400009121
Solanum tuberosum
PGSC0003DMG400009121
N
0.950
cassava2176.valid.m1
Manihot esculenta
cassava2176.valid.m1
N
0.939
PK12172.1
Cannabis sativa
PK12172.1
N
0.935
VIT_16s0098g00350
Vitis vinifera
VIT_16s0098g00350
N
0.929