CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Cla004317
(
Citrullus lanatus
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
Cla004317
T322134_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla004317
SAND
524
594
IRANKVTVLCNGVEGIYFPSLHLVVCKCGSCGTEKQALSEWEKHTGSKSRNWKTSVRVKGSMLSLEQWMLQ
Links
Other
SAND
family TFs
Other
Citrullus lanatus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.032070
Cucumis sativus
Cucsa.032070
N
0.991
PK12172.1
Cannabis sativa
PK12172.1
N
0.984
VIT_16s0098g00350
Vitis vinifera
VIT_16s0098g00350
N
0.978
Solyc03g083410.2
Solanum lycopersicum
Solyc03g083410.2
N
0.959
PGSC0003DMG400009121
Solanum tuberosum
PGSC0003DMG400009121
N
0.959
ATX4
Arabidopsis lyrata
scaffold_701476.1
N
0.951
cassava2176.valid.m1
Manihot esculenta
cassava2176.valid.m1
N
0.947