29983.m003255 (Ricinus communis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 29983.m003255 T322181_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29983.m003255 SAND 27 114

Links

Other SAND family TFs
Other Ricinus communis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.987
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.985
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.985
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.985
MDP0000089136 Malus domestica MDP0000089136 N 0.973
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.969
Cla007849 Citrullus lanatus Cla007849 N 0.969
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.968
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.964
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.960
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.958
PK16281.1 Cannabis sativa PK16281.1 N 0.954
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.946
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.945
TCM_007971 Theobroma cacao TCM_007971 N 0.943
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.935
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.933
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.932
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.932
Pm015354 Prunus mume Pm015354 N 0.930
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.930
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.928
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.928
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.927
MDP0000315130 Malus domestica MDP0000315130 N 0.927
MDP0000237588 Malus domestica MDP0000237588 N 0.927
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.920
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.919
OBART01G33150 Oryza barthii OBART01G33150 N 0.916
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.916
OB01G42000 Oryza brachyantha OB01G42000 N 0.916
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.916
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.916
OS01G0780800 Oryza sativa OS01G0780800 N 0.916
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.916
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.916
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.916
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.916
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.916
Ca_19014 Cicer arietinum Ca_19014 N 0.909
Aquca_102_00032 Aquilegia coerulea Aquca_102_00032 N 0.908
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.904
Si002762m.g Setaria italica Si002762m.g N 0.869
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.869
MTR_0072s0040 Medicago truncatula MTR_0072s0040 N 0.869
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.866