fgenesh2_pg.scaffold_59000072 (Branchiostoma floridae)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 fgenesh2_pg.scaffold_59000072 T322202_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.882 0.680
DEAF1
M11267_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.882 0.680
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_59000072 SAND 139 213

Links

Other SAND family TFs
Other Branchiostoma floridae TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL013408 Aedes aegypti AAEL013408 I 0.926
AALB004583 Anopheles albimanus AALB004583 I 0.930
Aan_R010721 Calypte anna Aan_R010721 I 0.892
AARA003510 Anopheles arabiensis AARA003510 I 0.930
AATE015987 Anopheles atroparvus AATE015987 I 0.930
ACEP13992 Atta cephalotes ACEP13992 I 0.918
ACHR007416 Anopheles christyi ACHR007416 I 0.930
ACOM036369 Anopheles coluzzii ACOM036369 I 0.930
ACUA011008 Anopheles culicifacies ACUA011008 I 0.930
ACYPI005878 Acyrthosiphon pisum ACYPI005878 N 0.948
ACYPI29974 Acyrthosiphon pisum ACYPI29974 N 0.959
ACYPI34776 Acyrthosiphon pisum ACYPI34776 N 0.962
ADAC006957 Anopheles darlingi ADAC006957 I 0.930
ADIR001685 Anopheles dirus ADIR001685 I 0.926
AEPI005273 Anopheles epiroticus AEPI005273 I 0.930
AFAF013455 Anopheles farauti AFAF013455 I 0.926
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.892
AFUN005053 Anopheles funestus AFUN005053 I 0.930
AGAP004905 Anopheles gambiae AGAP004905 I 0.930
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I 0.882
AMAM018568 Anopheles maculatus AMAM018568 I 0.927
AMEC000569 Anopheles melas AMEC000569 I 0.930
AMEM010249 Anopheles merus AMEM010249 I 0.930
AMIN011402 Anopheles minimus AMIN011402 I 0.930
AQUA000322 Anopheles quadriannulatus AQUA000322 I 0.930
ASIS014192 Anopheles sinensis ASIS014192 I 0.932
ASTEI10643 Anopheles stephensi ASTEI10643 I 0.927
BGIBMGA002019 Bombyx mori BGIBMGA002019 I 0.943
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.932
CapteG228571 Capitella teleta CapteG228571 I 0.941
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I 0.932
CGI_10012910 Crassostrea gigas CGI_10012910 I 0.929
CLEC001236 Cimex lectularius CLEC001236 I 0.865
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I 0.882
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.918
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.918
DEAF1 Macaca mulatta ENSMMUG00000002660 I 0.882
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.892
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I 0.848
DEAF1 Homo sapiens ENSG00000177030 I 0.882
DEAF1 Felis catus ENSFCAG00000007591 I 0.888
DEAF1 Equus caballus ENSECAG00000010151 I 0.882
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.893
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.888
deaf1 Danio rerio ENSDARG00000088844 I 0.855
deaf1 Xenopus tropicalis XB-GENE-1216227 I 0.868
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.893
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.893
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.888
DEAF1 Gorilla gorilla ENSGGOG00000014020 I 0.882
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.897
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.888
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.893
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.893
DEAF1 Myotis lucifugus ENSMLUG00000026576 I 0.882
Deaf1 Mus musculus ENSMUSG00000058886 I 0.893
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.893
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.893
DEAF1 Microcebus murinus ENSMICG00000001602 I 0.873
deaf1 Oryzias latipes ENSORLG00000019407 I 0.878
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.892
DEAF1 Pan troglodytes ENSPTRG00000003129 D 0.882
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.898
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.888
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.892
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I 0.882
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.892
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.892
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I 0.869
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I 0.873
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I 0.876
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.888
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I 0.882
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.893
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I 0.849
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.888
ENSP00000371846 Macaca fascicularis ENSP00000371846 I 0.882
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.893
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I 0.882
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I 0.852
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.948
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I 0.882
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I 0.876
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.893
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I 0.852
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I 0.994
GB41654 Apis mellifera GB41654 I 0.940
Gfo_R011899 Geospiza fortis Gfo_R011899 I 0.892
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.916
HMEL013517 Heliconius melpomene HMEL013517 I 0.932
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I 0.921
ISCW003915 Ixodes scapularis ISCW003915 I 0.910
KGM_18605 Danaus plexippus KGM_18605 I 0.933
L798_01684 Zootermopsis nevadensis L798_01684 I 0.951
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.942
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I 0.874
LotgiG168359 Lottia gigantea LotgiG168359 I 0.918
MCINX013640 Melitaea cinxia MCINX013640 I 0.933
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I 0.882
NV18168 Nasonia vitripennis NV18168 I 0.916
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I 0.918
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.892
PHUM581340 Pediculus humanus PHUM581340 I 0.903
PPAI007052 Phlebotomus papatasi PPAI007052 I 0.874
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.892
RPRC001228 Rhodnius prolixus RPRC001228 I 0.914
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I 0.938
SINV20880 Solenopsis invicta SINV20880 I 0.927
SMAR003119 Strigamia maritima SMAR003119 I 0.863
SPU_014381 Strongylocentrotus purpuratus SPU_014381 N 0.934
TC000085 Tribolium castaneum TC000085 I 0.957
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.955