CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_59000072
(
Branchiostoma floridae
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
fgenesh2_pg.scaffold_59000072
T322202_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.882
0.680
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.882
0.680
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_59000072
SAND
139
213
INLPVLPVRCRNTSGELYKSKLGSGGRGKCIKVGDVWYTPSEFEALSGRASSKDWKRSIRYGGRTLHTLIEEGVL
Links
Other
SAND
family TFs
Other
Branchiostoma floridae
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy