fgenesh2_pg.scaffold_59000072 (Branchiostoma floridae)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 fgenesh2_pg.scaffold_59000072 T322202_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.882 0.680
DEAF1
M11267_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.882 0.680
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_59000072 SAND 139 213

Links

Other SAND family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action