Gorai.008G152400 (Gossypium raimondii)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Gorai.008G152400 T322254_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G152400.1 SAND 28 114

Links

Other SAND family TFs
Other Gossypium raimondii TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_007971 Theobroma cacao TCM_007971 N 0.985
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.982
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.981
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.973
Pm015354 Prunus mume Pm015354 N 0.972
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.972
MDP0000237588 Malus domestica MDP0000237588 N 0.971
MDP0000315130 Malus domestica MDP0000315130 N 0.971
Ca_19014 Cicer arietinum Ca_19014 N 0.966
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.964
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.964
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.963
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.956
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.953
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.949
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.948
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.945
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.941
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.941
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.933
MDP0000089136 Malus domestica MDP0000089136 N 0.931
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.930
29983.m003255 Ricinus communis 29983.m003255 N 0.928
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.928
Cla007849 Citrullus lanatus Cla007849 N 0.928
Bo7g111950 Brassica oleracea Bo7g111950 N 0.925
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.922
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.920
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.920
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.906
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.900
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.900
MTR_0072s0040 Medicago truncatula MTR_0072s0040 N 0.895
Bo1g051270 Brassica oleracea Bo1g051270 N 0.888
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.878
Bra026276 Brassica rapa Bra026276 N 0.871
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N 0.866
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.848
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N 0.848
PK16281.1 Cannabis sativa PK16281.1 N 0.846