Pavir.Db00082 (Panicum virgatum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pavir.Db00082 T322265_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00082.1.p SAND 250 290
Pavir.Db00082.1.p SAND 428 484

Links

Other SAND family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G387485 Zea mays GRMZM2G387485 N 0.985
Si005834m.g Setaria italica Si005834m.g N 0.984
Pavir.J04848 Panicum virgatum Pavir.J04848 N 0.978
ONIVA06G31450 Oryza nivara ONIVA06G31450 N 0.971
ORGLA06G0289000 Oryza glaberrima ORGLA06G0289000 N 0.971
OLONG_013922 Oryza longistaminata OLONG_013922 N 0.971
OB06G36080 Oryza brachyantha OB06G36080 N 0.971
OGLUM06G29720 Oryza glumaepatula OGLUM06G29720 N 0.971
OBART06G28330 Oryza barthii OBART06G28330 N 0.971
Traes_7AL_153E1A74A Triticum aestivum Traes_7AL_153E1A74A N 0.961
LPERR06G23780 Leersia perrieri LPERR06G23780 N 0.897
ORUFI06G30250 Oryza rufipogon ORUFI06G30250 N 0.895