Pavir.Ib01291 (Panicum virgatum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pavir.Ib01291 T322268_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01291.10.p SAND 30 102
Pavir.Ib01291.10.p SAND 564 628
Pavir.Ib01291.11.p SAND 30 102
Pavir.Ib01291.11.p SAND 565 629
Pavir.Ib01291.12.p SAND 30 102
Pavir.Ib01291.12.p SAND 565 629
Pavir.Ib01291.13.p SAND 564 628
Pavir.Ib01291.14.p SAND 565 629
Pavir.Ib01291.15.p SAND 30 102
Pavir.Ib01291.15.p SAND 564 628
Pavir.Ib01291.16.p SAND 30 102
Pavir.Ib01291.16.p SAND 565 629
Pavir.Ib01291.1.p SAND 565 629
Pavir.Ib01291.2.p SAND 442 506
Pavir.Ib01291.3.p SAND 443 507
Pavir.Ib01291.4.p SAND 442 506
Pavir.Ib01291.5.p SAND 443 507
Pavir.Ib01291.6.p SAND 564 628
Pavir.Ib01291.7.p SAND 564 628
Pavir.Ib01291.8.p SAND 565 629
Pavir.Ib01291.9.p SAND 30 102
Pavir.Ib01291.9.p SAND 564 628

Links

Other SAND family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia03655 Panicum virgatum Pavir.Ia03655 N 0.986
Si034123m.g Setaria italica Si034123m.g N 0.985
BRADI1G66400 Brachypodium distachyon BRADI1G66400 N 0.854