Pavir.J04848 (Panicum virgatum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pavir.J04848 T322269_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04848.1.p SAND 259 301
Pavir.J04848.1.p SAND 437 493

Links

Other SAND family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA06G31450 Oryza nivara ONIVA06G31450 N 0.992
ORGLA06G0289000 Oryza glaberrima ORGLA06G0289000 N 0.992
OGLUM06G29720 Oryza glumaepatula OGLUM06G29720 N 0.992
OLONG_013922 Oryza longistaminata OLONG_013922 N 0.992
OBART06G28330 Oryza barthii OBART06G28330 N 0.992
OB06G36080 Oryza brachyantha OB06G36080 N 0.992
Si005834m.g Setaria italica Si005834m.g N 0.986
GRMZM2G387485 Zea mays GRMZM2G387485 N 0.986
Pavir.Db00082 Panicum virgatum Pavir.Db00082 N 0.978
Traes_7AL_153E1A74A Triticum aestivum Traes_7AL_153E1A74A N 0.972
LPERR06G23780 Leersia perrieri LPERR06G23780 N 0.970
ORUFI06G30250 Oryza rufipogon ORUFI06G30250 N 0.969