SPL10 (Arabidopsis thaliana)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 AT1G27370 T322389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN

NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL11
M02471_2.00
Arabidopsis thaliana
NNNHGTACGGWN

NWCCGTACDNNN
PBM
Weirauch et al.(2014)
pTH9392
0.967 0.933
SPL11
M07254_2.00
Arabidopsis thaliana
HTGTACTDDHH

DDHHAGTACAD
Dap-seq
OMalley et al.(2016)
SPL11_col100_a
0.967 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01084_2.00 SBP 52 126

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G27370.1 SBP 176 250
AT1G27370.2 SBP 176 250
AT1G27370.3 SBP 176 250
AT1G27370.4 SBP 176 250
AT1G27370.5 SBP 176 250
AT1G27370.6 SBP 176 250
AT1G27370.7 SBP 176 250

Links

Other SBP family TFs
Other Arabidopsis thaliana TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SINV13301 Solenopsis invicta SINV13301 N 0.000