CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPL7
(
Arabidopsis thaliana
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
AT5G18830
T322399_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
(Direct)
(Direct)
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN
NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.885
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00888_2.00
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
M02476_2.00
SBP
52
126
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G18830.1
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
AT5G18830.2
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
AT5G18830.3
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
Links
Other
SBP
family TFs
Other
Arabidopsis thaliana
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_121841
Agaricus bisporus
AGABI2DRAFT_121841
N
0.000
M422DRAFT_51716
Sphaerobolus stellatus
M422DRAFT_51716
N
0.000
Moror_9126
Moniliophthora roreri
Moror_9126
N
0.000
MPER_02700
Moniliophthora perniciosa
MPER_02700
N
0.000
PAXINDRAFT_171258
Paxillus involutus
PAXINDRAFT_171258
N
0.000
PAXRUDRAFT_13038
Paxillus rubicundulus
PAXRUDRAFT_13038
N
0.000
PHACADRAFT_260812
Phanerochaete carnosa
PHACADRAFT_260812
N
0.000
PILCRDRAFT_820945
Piloderma croceum
PILCRDRAFT_820945
N
0.000
PILCRDRAFT_88827
Piloderma croceum
PILCRDRAFT_88827
N
0.000
PISMIDRAFT_111299
Pisolithus microcarpus
PISMIDRAFT_111299
N
0.000
PLEOSDRAFT_1059069
Pleurotus ostreatus
PLEOSDRAFT_1059069
N
0.000
POSPLDRAFT_90448
Postia placenta
POSPLDRAFT_90448
N
0.000
PUNSTDRAFT_122479
Punctularia strigosozonata
PUNSTDRAFT_122479
N
0.000
SCHCODRAFT_66326
Schizophyllum commune
SCHCODRAFT_66326
N
0.000
SCHCODRAFT_86018
Schizophyllum commune
SCHCODRAFT_86018
N
0.000
SCLCIDRAFT_18361
Scleroderma citrinum
SCLCIDRAFT_18361
N
0.000
M413DRAFT_251633
Hebeloma cylindrosporum
M413DRAFT_251633
N
0.000
M378DRAFT_335299
Amanita muscaria
M378DRAFT_335299
N
0.000
LACBIDRAFT_293949
Laccaria bicolor
LACBIDRAFT_293949
N
0.000
BN946_scf184902.g31
Trametes cinnabarina
BN946_scf184902.g31
N
0.000
BOTBODRAFT_462541
Botryobasidium botryosum
BOTBODRAFT_462541
N
0.000
CC1G_01569
Coprinopsis cinerea
CC1G_01569
N
0.000
CERSUDRAFT_116480
Ceriporiopsis subvermispora
CERSUDRAFT_116480
N
0.000
CY34DRAFT_557025
Suillus luteus
CY34DRAFT_557025
N
0.000
DACRYDRAFT_54061
Dacryopinax sp
DACRYDRAFT_54061
N
0.000
DICSQDRAFT_147115
Dichomitus squalens
DICSQDRAFT_147115
N
0.000
GALMADRAFT_224580
Galerina marginata
GALMADRAFT_224580
N
0.000
GLOTRDRAFT_18412
Gloeophyllum trabeum
GLOTRDRAFT_18412
N
0.000
GYMLUDRAFT_145769
Gymnopus luxurians
GYMLUDRAFT_145769
N
0.000
GYMLUDRAFT_59059
Gymnopus luxurians
GYMLUDRAFT_59059
N
0.000
HETIRDRAFT_322707
Heterobasidion irregulare
HETIRDRAFT_322707
N
0.000
HYDPIDRAFT_177790
Hydnomerulius pinastri
HYDPIDRAFT_177790
N
0.000
JAAARDRAFT_36799
Jaapia argillacea
JAAARDRAFT_36799
N
0.000
K443DRAFT_384813
Laccaria amethystina
K443DRAFT_384813
N
0.000
SERLA73DRAFT_65990
Serpula lacrymans
SERLA73DRAFT_65990
N
0.000