CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPL7
(
Arabidopsis thaliana
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
AT5G18830
T322399_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
(Direct)
(Direct)
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN
NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.885
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00888_2.00
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
M02476_2.00
SBP
52
126
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G18830.1
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
AT5G18830.2
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
AT5G18830.3
SBP
138
212
CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRK
Links
Other
SBP
family TFs
Other
Arabidopsis thaliana
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy