CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G59110
(
Brachypodium distachyon
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
BRADI2G59110
T322491_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.958
0.760
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.895
0.707
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.891
0.640
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G59110.1
SBP
68
142
CSVEGCAADLSRCREYHRRHKVCEAHSKTPVVSVAGQQQRFCQQCSRFHLLVEFDEVKRSCRKRLDGHNRRRRKQ
Links
Other
SBP
family TFs
Other
Brachypodium distachyon
TFs
276 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy