TF Information

fgenesh1_pg.C_scaffold_2001253 *(Arabidopsis lyrata)* SBP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03110 (SBP)	IPR004333	fgenesh1_pg.C_scaffold_2001253	T322547_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SPL5 M02474_2.00	Arabidopsis thaliana	NNGTACGDN	NHCGTACNN	PBM Weirauch et al.(2014) pTH7385	0.896	0.667
SPL5 M07261_2.00	Arabidopsis thaliana	NDNYGTACGGAH	DTCCGTACRNHN	Dap-seq OMalley et al.(2016) SPL5_col_a	0.896	0.667
SPL5 M07262_2.00	Arabidopsis thaliana	NBGTACGGWH	DWCCGTACVN	Dap-seq OMalley et al.(2016) SPL5_colamp_a	0.896	0.667
estExt_fgenesh1_pg.C_1940033 M02479_2.00	Physcomitrella patens	NNGTACGDH	DHCGTACNN	PBM Weirauch et al.(2014) pTH8664	0.895	0.760
For this family, TFs with SR scores > 0.885* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
fgenesh1_pg.C_scaffold_2001253	SBP	129	203	CQVYGCNMDLSSSKDYHKRHRVCEAHSKTSVVVVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKP

Links
Other SBP family TFs
Other *Arabidopsis lyrata* TFs

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277 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action