GLYMA02G30670 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA02G30670 T322561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.915 0.680
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.911 0.773
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.906 0.707
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.906 0.707
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.906 0.707
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G30670.2 SBP 75 149

Links

Other SBP family TFs
Other Glycine max TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29269.m000250 Ricinus communis 29269.m000250 I 0.966
29929.m004627 Ricinus communis 29929.m004627 I 0.906
30138.m003942 Ricinus communis 30138.m003942 I 0.896
30174.m009082 Ricinus communis 30174.m009082 I 0.894
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.913
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.926
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.886
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.904
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.894
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.897
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.956
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.926
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.898
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.903
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.931
Bo3g024180 Brassica oleracea Bo3g024180 I 0.915
Bo3g042890 Brassica oleracea Bo3g042890 I 0.892
Bo6g031220 Brassica oleracea Bo6g031220 I 0.898
Bo9g097630 Brassica oleracea Bo9g097630 I 0.916
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.915
Bra022766 Brassica rapa Bra022766 I 0.913
Bra039656 Brassica rapa Bra039656 I 0.898
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.956
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.944
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.915
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.915
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.935
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.893
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.897
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.896
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.906
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.893
Ca_01426 Cicer arietinum Ca_01426 I 0.916
Ca_05711 Cicer arietinum Ca_05711 I 0.926
Ca_07299 Cicer arietinum Ca_07299 I 0.970
Ca_19449 Cicer arietinum Ca_19449 I 0.895
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.887
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.974
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.899
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.932
Cla001541 Citrullus lanatus Cla001541 I 0.911
Cla002666 Citrullus lanatus Cla002666 I 0.922
Cla018827 Citrullus lanatus Cla018827 I 0.895
Cla019331 Citrullus lanatus Cla019331 I 0.895
Cla019579 Citrullus lanatus Cla019579 I 0.905
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.895
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.919
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.895
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.965
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.911
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.922
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.900
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.911
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.965
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.895
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.911
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.918
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.901
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.892
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.900
F775_10743 Aegilops tauschii F775_10743 I 0.950
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.911
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.924
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.959
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.920
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.889
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.895
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.960
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.895
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.916
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.902
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.916
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.913
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.887
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.895
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.929
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.963
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.899
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.960
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.904
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.912
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.944
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.925
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.896
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.932
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.886
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.960
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.932
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.904
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.895
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.921
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.892
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.905
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.940
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.888
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.915
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.949
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.916
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.949
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.953
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.898
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.947
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.909
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.946
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.912
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.906
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.921
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.903
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.889
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.911
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.944
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.889
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.915
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.904
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.915
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.932
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.895
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.932
MDP0000146640 Malus domestica MDP0000146640 I 0.894
MDP0000180408 Malus domestica MDP0000180408 I 0.892
MDP0000180409 Malus domestica MDP0000180409 I 0.889
MDP0000262141 Malus domestica MDP0000262141 I 0.910
MDP0000297978 Malus domestica MDP0000297978 I 0.943
MDP0000778465 Malus domestica MDP0000778465 I 0.894
MDP0000919693 Malus domestica MDP0000919693 I 0.893
MDP0000919694 Malus domestica MDP0000919694 I 0.897
mgf001295m Mimulus guttatus mgf001295m I 0.943
mgf012995m Mimulus guttatus mgf012995m I 0.929
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.968
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.895
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.916
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.895
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.970
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.926
OB08G26920 Oryza brachyantha OB08G26920 I 0.939
OB08G27190 Oryza brachyantha OB08G27190 I 0.888
OB09G21350 Oryza brachyantha OB09G21350 N 0.896
OBART09G14800 Oryza barthii OBART09G14800 I 0.944
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.903
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.937
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.944
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.903
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.944
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.903
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.937
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.944
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.903
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.937
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.944
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.899
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.925
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.974
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.903
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.937
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.944
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.903
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.937
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.944
OS01G0922600 Oryza sativa OS01G0922600 I 0.887
OS09G0491532 Oryza sativa OS09G0491532 I 0.931
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.944
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.943
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.944
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.917
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.898
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.891
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.891
PK02140.1 Cannabis sativa PK02140.1 I 0.925
PK11310.1 Cannabis sativa PK11310.1 I 0.916
PK17790.1 Cannabis sativa PK17790.1 I 0.904
PK18312.1 Cannabis sativa PK18312.1 I 0.968
PK19500.1 Cannabis sativa PK19500.1 I 0.908
Pm002693 Prunus mume Pm002693 I 0.943
Pm007035 Prunus mume Pm007035 I 0.938
Pm008474 Prunus mume Pm008474 I 0.889
Pm008475 Prunus mume Pm008475 I 0.889
Pm017778 Prunus mume Pm017778 I 0.913
Pm024528 Prunus mume Pm024528 I 0.922
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.905
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.888
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.917
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.887
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.895
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.922
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.888
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.891
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.923
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.889
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.892
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.922
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.943
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.943
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.909
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.913
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.888
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.958
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.895
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.917
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.922
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.888
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.926
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.905
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.938
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.903
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.894
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.941
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.916
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.893
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.893
Si013870m.g Setaria italica Si013870m.g I 0.944
Si030195m.g Setaria italica Si030195m.g I 0.944
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.891
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.891
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.898
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.917
SPL1 Arabidopsis thaliana AT2G47070 D 0.906
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.887
SPL13A Arabidopsis thaliana AT5G50670 D 0.915
SPL13A Arabidopsis thaliana AT5G50570 I 0.915
SPL14 Oryza sativa OS08G0509600 I 0.937
TCM_008671 Theobroma cacao TCM_008671 I 0.925
TCM_014330 Theobroma cacao TCM_014330 I 0.896
TCM_014668 Theobroma cacao TCM_014668 I 0.901
TCM_021482 Theobroma cacao TCM_021482 I 0.887
TCM_024873 Theobroma cacao TCM_024873 I 0.966
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.916
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.901
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.944
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.936
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.899
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.887
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.966
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.918
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.895
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.902