GLYMA03G27195 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA03G27195 T322563_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.889 0.693
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.889 0.693
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.889 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA03G27195.1 SBP 160 234
GLYMA03G27195.2 SBP 160 234

Links

Other SBP family TFs
Other Glycine max TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G14641 Glycine max GLYMA07G14641 I 0.975
Cla021411 Citrullus lanatus Cla021411 I 0.967
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I 0.966
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.964
TCM_005620 Theobroma cacao TCM_005620 I 0.961
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.961
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.961
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.960
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.960
Ca_10879 Cicer arietinum Ca_10879 I 0.960
30174.m008805 Ricinus communis 30174.m008805 I 0.960
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.958
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.957
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I 0.957
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.957
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.956
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.956
Si010262m.g Setaria italica Si010262m.g I 0.956
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.956
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.954
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I 0.953
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.949
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I 0.946
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I 0.946
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I 0.945
MTR_2g014200 Medicago truncatula MTR_2g014200 I 0.944
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.943
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.943
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.943
F775_02791 Aegilops tauschii F775_02791 I 0.943
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I 0.940
Bo2g062840 Brassica oleracea Bo2g062840 I 0.935
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I 0.934
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.933
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.932
Bra038324 Brassica rapa Bra038324 I 0.932
Pm030597 Prunus mume Pm030597 I 0.931
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.931
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.931
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.929
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.928
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.928
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.928
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.928
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.928
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.928
OB04G27960 Oryza brachyantha OB04G27960 I 0.926
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.926
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.926
Pm017778 Prunus mume Pm017778 I 0.926
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.925
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.925
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.925
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.925
OBART04G20940 Oryza barthii OBART04G20940 I 0.925
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.925
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.925
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.925
SPL7 Oryza sativa OS04G0551500 I 0.925
Cla009788 Citrullus lanatus Cla009788 I 0.924
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.923
30190.m011329 Ricinus communis 30190.m011329 I 0.922
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.922
SPL6 Arabidopsis thaliana AT1G69170 I 0.922
MDP0000171877 Malus domestica MDP0000171877 I 0.921
MDP0000246046 Malus domestica MDP0000246046 I 0.921
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I 0.920
mgf025134m Mimulus guttatus mgf025134m I 0.919
MDP0000262141 Malus domestica MDP0000262141 I 0.917
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I 0.917
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.915
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.915
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.914
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I 0.912
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.911
Si032170m.g Setaria italica Si032170m.g I 0.911
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.911
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I 0.907
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.907
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.907
SapurV1A.0382s0120 Salix purpurea SapurV1A.0382s0120 I 0.907
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I 0.907
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.907
VIT_04s0210g00170 Vitis vinifera VIT_04s0210g00170 N 0.904
Lus10018610.g Linum usitatissimum Lus10018610.g I 0.903
Lus10039846.g Linum usitatissimum Lus10039846.g I 0.903
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I 0.903
Ca_24655 Cicer arietinum Ca_24655 I 0.902
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I 0.901
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.901
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.901
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.898
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.898
Ca_00320 Cicer arietinum Ca_00320 I 0.896
MDP0000193702 Malus domestica MDP0000193702 I 0.896
MDP0000119458 Malus domestica MDP0000119458 I 0.896
PK26639.1 Cannabis sativa PK26639.1 I 0.895
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.895
MTR_4g088555 Medicago truncatula MTR_4g088555 I 0.895
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.895
MDP0000589558 Malus domestica MDP0000589558 I 0.892
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.892
Ca_24733 Cicer arietinum Ca_24733 I 0.890
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.890
Pm014154 Prunus mume Pm014154 I 0.889
SPL5 Arabidopsis thaliana AT3G15270 D 0.889
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.889
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.888
OBART07G15570 Oryza barthii OBART07G15570 I 0.888
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.888
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.888
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.888
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.888
TCM_017247 Theobroma cacao TCM_017247 N 0.887
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.887
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.887
Cucsa.272530 Cucumis sativus Cucsa.272530 I 0.886