GLYMA13G28460 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA13G28460 T322585_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL7
M02476_2.00 		Arabidopsis thaliana
DGTACKDNN
NNHMGTACH		 PBM
Weirauch et al.(2014)
pTH7288 		0.968 0.827
SPL7
M00888_2.00 		Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC		 PBM
Franco-Zorrilla et al.(2014)
SPL7 		0.968 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G28460.3 SBP 114 188

Links

Other SBP family TFs
Other Glycine max TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART05G16150 Oryza barthii OBART05G16150 I 0.978
OB05G24080 Oryza brachyantha OB05G24080 I 0.978
LPERR05G12780 Leersia perrieri LPERR05G12780 I 0.978
OGLUM05G17090 Oryza glumaepatula OGLUM05G17090 I 0.978
OLONG_015968 Oryza longistaminata OLONG_015968 I 0.978
SPL9 Oryza sativa OS05G0408200 I 0.978
ORUFI05G17320 Oryza rufipogon ORUFI05G17320 I 0.978
ONIVA05G16770 Oryza nivara ONIVA05G16770 I 0.978
Sb09g020110 Sorghum bicolor Sb09g020110 I 0.978
Cla022022 Citrullus lanatus Cla022022 I 0.978
GRMZM2G109354 Zea mays GRMZM2G109354 I 0.978
Cucsa.253690 Cucumis sativus Cucsa.253690 I 0.978
Pavir.J03653 Panicum virgatum Pavir.J03653 I 0.978
OPUNC05G14270 Oryza punctata OPUNC05G14270 I 0.977
orange1.1g003787m.g Citrus sinensis orange1.1g003787m.g I 0.977
Ciclev10004348m.g Citrus clementina Ciclev10004348m.g I 0.977
Traes_1BL_8709BB152 Triticum aestivum Traes_1BL_8709BB152 I 0.976
cassava7956.valid.m1 Manihot esculenta cassava7956.valid.m1 I 0.976
AMTR_s00197p00030350 Amborella trichopoda AMTR_s00197p00030350 I 0.976
Lus10033993.g Linum usitatissimum Lus10033993.g I 0.976
Eucgr.B01228 Eucalyptus grandis Eucgr.B01228 I 0.976
Lus10012782.g Linum usitatissimum Lus10012782.g I 0.976
cassava7955.valid.m1 Manihot esculenta cassava7955.valid.m1 I 0.976
Solyc01g080670.2 Solanum lycopersicum Solyc01g080670.2 I 0.976
PGSC0003DMG401006284 Solanum tuberosum PGSC0003DMG401006284 I 0.976
29726.m003959 Ricinus communis 29726.m003959 I 0.975
Carubv10002913m.g Capsella rubella Carubv10002913m.g I 0.975
Bostr.26527s0326 Boechera stricta Bostr.26527s0326 I 0.975
Cagra.0263s0012 Capsella grandiflora Cagra.0263s0012 I 0.975
GSMUA_Achr9G17440_001 Musa acuminata GSMUA_Achr9G17440_001 I 0.975
SPL7 Vitis vinifera VIT_05s0020g02160 I 0.975
Pavir.J00965 Panicum virgatum Pavir.J00965 I 0.975
Bra002188 Brassica rapa Bra002188 I 0.974
Bo9g154530 Brassica oleracea Bo9g154530 I 0.974
Si021754m.g Setaria italica Si021754m.g I 0.974
GSMUA_Achr3G23780_001 Musa acuminata GSMUA_Achr3G23780_001 I 0.973
TCM_021101 Theobroma cacao TCM_021101 I 0.973
F775_04392 Aegilops tauschii F775_04392 I 0.971
Thhalv10012721m.g Eutrema salsugineum Thhalv10012721m.g I 0.971
Gorai.011G183800 Gossypium raimondii Gorai.011G183800 I 0.971
SPL7 Arabidopsis lyrata scaffold_601959.1 I 0.971
MTR_2g020620 Medicago truncatula MTR_2g020620 I 0.971
Ca_00550 Cicer arietinum Ca_00550 I 0.969
GSMUA_Achr3G09190_001 Musa acuminata GSMUA_Achr3G09190_001 I 0.968
SPL7 Arabidopsis thaliana AT5G18830 D 0.968
POPTR_0008s20160 Populus trichocarpa POPTR_0008s20160 I 0.967
PK29723.1 Cannabis sativa PK29723.1 I 0.965
Gorai.005G056500 Gossypium raimondii Gorai.005G056500 I 0.964
mgf004695m Mimulus guttatus mgf004695m I 0.964
BRADI2G25580 Brachypodium distachyon BRADI2G25580 I 0.959
GSMUA_Achr5G26880_001 Musa acuminata GSMUA_Achr5G26880_001 I 0.958
SapurV1A.0152s0370 Salix purpurea SapurV1A.0152s0370 I 0.955
POPTR_0010s02710 Populus trichocarpa POPTR_0010s02710 I 0.955
MDP0000271587 Malus domestica MDP0000271587 I 0.955
PRUPE_ppa001613mg Prunus persica PRUPE_ppa001613mg I 0.954
Pm008092 Prunus mume Pm008092 I 0.954
gene06692-v1.0-hybrid Fragaria vesca gene06692-v1.0-hybrid I 0.954
Bo00629s160 Brassica oleracea Bo00629s160 I 0.952
Bra023695 Brassica rapa Bra023695 I 0.952
MDP0000195461 Malus domestica MDP0000195461 I 0.950
cassava1985.valid.m1 Manihot esculenta cassava1985.valid.m1 I 0.947
Aquca_026_00098 Aquilegia coerulea Aquca_026_00098 I 0.941
SapurV1A.0407s0040 Salix purpurea SapurV1A.0407s0040 I 0.936
SELMODRAFT_49860 Selaginella moellendorffii SELMODRAFT_49860 I 0.901
SELMODRAFT_49859 Selaginella moellendorffii SELMODRAFT_49859 I 0.901