GRMZM2G126018 (Zea mays)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GRMZM2G126018 T322616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.914 0.747
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.909 0.653
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.897 0.640
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.891 0.667
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.888 0.693
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.888 0.693
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.888 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G126018_P01 SBP 55 129
GRMZM2G126018_P02 SBP 55 129

Links

Other SBP family TFs
Other Zea mays TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CADANGAG00013649 Aspergillus niger CADANGAG00013649 N 0.000
BBA_04183 Beauveria bassiana BBA_04183 N 0.000
CCM_02568 Cordyceps militaris CCM_02568 N 0.000
NechaG29793 Fusarium solani NechaG29793 N 0.000
e_gw1.8.413.1 Nectria haematococca e_gw1.8.413.1 N 0.000
PFICI_13831 Pestalotiopsis fici PFICI_13831 N 0.000
VHEMI02121 Torrubiella hemipterigena VHEMI02121 N 0.000