GRMZM2G160917 (Zea mays)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GRMZM2G160917 T322624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.890 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G160917_P01 SBP 83 158
GRMZM2G160917_P02 SBP 83 158
GRMZM2G160917_P03 SBP 83 158

Links

Other SBP family TFs
Other Zea mays TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.975
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.967
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.967
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.967
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.967
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.967
OBART09G14800 Oryza barthii OBART09G14800 I 0.967
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.967
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.966
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.964
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.964
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.963
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.962
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.960
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.960
Si013870m.g Setaria italica Si013870m.g I 0.958
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.958
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.957
OB08G26920 Oryza brachyantha OB08G26920 I 0.957
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.957
F775_10743 Aegilops tauschii F775_10743 I 0.956
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.954
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.953
SPL14 Oryza sativa OS08G0509600 I 0.953
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.953
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.953
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.953
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.953
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.952
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.951
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.948
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.948
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.948
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.948
Si030195m.g Setaria italica Si030195m.g I 0.948
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.948
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.948
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.947
TCM_024873 Theobroma cacao TCM_024873 I 0.947
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.947
29269.m000250 Ricinus communis 29269.m000250 I 0.947
PK18312.1 Cannabis sativa PK18312.1 I 0.945
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.944
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.944
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.942
OS09G0491532 Oryza sativa OS09G0491532 I 0.942
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.942
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.940
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.940
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.940
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.938
OB09G21350 Oryza brachyantha OB09G21350 N 0.936
mgf012995m Mimulus guttatus mgf012995m I 0.935
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.935
Ca_07299 Cicer arietinum Ca_07299 I 0.933
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.933
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.933
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.929
PK11310.1 Cannabis sativa PK11310.1 I 0.927
MDP0000297978 Malus domestica MDP0000297978 I 0.926
Pm002693 Prunus mume Pm002693 I 0.926
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.926
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.926
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.924
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.924
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.919
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.912
mgf001295m Mimulus guttatus mgf001295m I 0.912
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.912
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.909
Pm007035 Prunus mume Pm007035 I 0.908
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.908
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.906
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.906
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.902
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.902
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.901
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.901
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.899
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.898
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.898
TCM_014668 Theobroma cacao TCM_014668 I 0.898
PK17790.1 Cannabis sativa PK17790.1 I 0.898
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.897
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.897
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.896
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.896
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.894
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.894
SELMODRAFT_28597 Selaginella moellendorffii SELMODRAFT_28597 I 0.894
SELMODRAFT_79699 Selaginella moellendorffii SELMODRAFT_79699 I 0.894
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.893
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.893
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.892
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.892
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.892
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.892
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.891
30174.m009082 Ricinus communis 30174.m009082 I 0.890
TCM_014330 Theobroma cacao TCM_014330 I 0.890
30138.m003942 Ricinus communis 30138.m003942 I 0.890
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.890
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.890
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.890
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.889
Cla019331 Citrullus lanatus Cla019331 I 0.889
PK02140.1 Cannabis sativa PK02140.1 I 0.889
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.889
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.889
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.889
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.889
Ca_19449 Cicer arietinum Ca_19449 I 0.889
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.889
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.889
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.889
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.889
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.889
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.889
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.888
MDP0000778465 Malus domestica MDP0000778465 I 0.888
MDP0000146640 Malus domestica MDP0000146640 I 0.888
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.888
29929.m004627 Ricinus communis 29929.m004627 I 0.888
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.888
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.887
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.887
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.887
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.887
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.887
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.886
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.886
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.886
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.886
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.886
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.886