GSMUA_Achr3G00810_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr3G00810_001 T322642_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.945 0.800
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.926 0.800
fgenesh1_pg.scaffold_194000034
M02480_2.00
Physcomitrella patens
NNNGTACNNN

NNNGTACNNN
PBM
Weirauch et al.(2014)
pTH8580
0.918 0.787
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P00810_001 SBP 136 210

Links

Other SBP family TFs
Other Musa acuminata TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_07803 Aegilops tauschii F775_07803 I 0.000
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.000
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I 0.000
Aquca_002_01218 Aquilegia coerulea Aquca_002_01218 I 0.000
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.000
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I 0.000
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I 0.000
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.000
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.000
GBF1 Arabidopsis thaliana AT4G36730 D 0.000
GBF2 Arabidopsis thaliana AT4G01120 D 0.000
GBF3 Arabidopsis thaliana AT2G46270 D 0.000
BZIP16 Arabidopsis thaliana AT2G35530 D 0.000
BZIP68 Arabidopsis thaliana AT1G32150 D 0.000
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.000
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I 0.000
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.000
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.000
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.000
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.000
Bo9g003700 Brassica oleracea Bo9g003700 I 0.000
Bo4g038560 Brassica oleracea Bo4g038560 I 0.000
Bo4g010410 Brassica oleracea Bo4g010410 I 0.000
Bo1g005460 Brassica oleracea Bo1g005460 I 0.000
Bra011701 Brassica rapa Bra011701 I 0.000
Bra004550 Brassica rapa Bra004550 I 0.000
Bra005335 Brassica rapa Bra005335 I 0.000
Bra010572 Brassica rapa Bra010572 I 0.000
Bra037382 Brassica rapa Bra037382 I 0.000
PK09653.1 Cannabis sativa PK09653.1 D 0.000
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.000
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.000
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I 0.000
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.000
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I 0.000
Carubv10001247m.g Capsella rubella Carubv10001247m.g I 0.000
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.000
Carubv10023434m.g Capsella rubella Carubv10023434m.g I 0.000
Ca_01293 Cicer arietinum Ca_01293 I 0.000
Ca_15839 Cicer arietinum Ca_15839 I 0.000
Cla021500 Citrullus lanatus Cla021500 I 0.000
Cla014415 Citrullus lanatus Cla014415 I 0.000
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I 0.000
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I 0.000
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.000
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.000
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.000
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I 0.000
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.000
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I 0.000
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.000
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.000
gene32024-v1.0-hybrid Fragaria vesca gene32024-v1.0-hybrid I 0.000
gene32022-v1.0-hybrid Fragaria vesca gene32022-v1.0-hybrid I 0.000
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.000
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.000
GLYMA19G44190 Glycine max GLYMA19G44190 I 0.000
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.000
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.000
GLYMA03G41590 Glycine max GLYMA03G41590 I 0.000
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.000
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.000
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.000
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.000
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.000
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.000
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.000
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.000
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.000
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.000
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.000
MDP0000138052 Malus domestica MDP0000138052 I 0.000
MDP0000239688 Malus domestica MDP0000239688 I 0.000
MDP0000493795 Malus domestica MDP0000493795 I 0.000
MDP0000545420 Malus domestica MDP0000545420 I 0.000
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.000
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.000
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.000
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.000
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.000
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.000
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.000
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.000
mgf003302m Mimulus guttatus mgf003302m I 0.000
mgf013423m Mimulus guttatus mgf013423m I 0.000
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I 0.000
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I 0.000
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.000
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I 0.000
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I 0.000
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I 0.000
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I 0.000
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.000
OBART01G25300 Oryza barthii OBART01G25300 I 0.000
OBART05G26280 Oryza barthii OBART05G26280 I 0.000
OB05G33790 Oryza brachyantha OB05G33790 I 0.000
OB01G34490 Oryza brachyantha OB01G34490 I 0.000
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.000
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.000
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.000
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.000
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.000
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.000
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.000
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.000
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.000
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.000
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.000
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.000
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.000
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.000
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.000
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.000
OS01G0658900 Oryza sativa OS01G0658900 I 0.000
OS05G0569300 Oryza sativa OS05G0569300 I 0.000
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.000
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I 0.000
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.000
Pavir.J01411 Panicum virgatum Pavir.J01411 I 0.000
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.000
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I 0.000
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I 0.000
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.000
Pm018422 Prunus mume Pm018422 I 0.000
Pm024103 Prunus mume Pm024103 I 0.000
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.000
PRUPE_ppa020524mg Prunus persica PRUPE_ppa020524mg I 0.000
30174.m008698 Ricinus communis 30174.m008698 I 0.000
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.000
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.000
Si001929m.g Setaria italica Si001929m.g I 0.000
Si022388m.g Setaria italica Si022388m.g I 0.000
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.000
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.000
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.000
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.000
TCM_005210 Theobroma cacao TCM_005210 I 0.000
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.000
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.000
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.000
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.000
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I 0.000
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.000
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.000
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.000
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.000
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.000
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.000
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.000