CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G05720_001
(
Musa acuminata
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
GSMUA_Achr4G05720_001
T322651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P05720_001
SBP
56
130
CQVEGCNIDLSGAKEYHRKHRVCETHSKFPKVIVAGQERRFCQQCSRFHDLSEFDQKKRSCRRRLSDHNARRRKP
Links
Other
SBP
family TFs
Other
Musa acuminata
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_6AS_32A35158A
Triticum aestivum
Traes_6AS_32A35158A
N
0.973
Traes_6DS_C4D93239C
Triticum aestivum
Traes_6DS_C4D93239C
N
0.973
GSMUA_Achr9G23140_001
Musa acuminata
GSMUA_Achr9G23140_001
I
0.971
GSMUA_Achr4G12470_001
Musa acuminata
GSMUA_Achr4G12470_001
I
0.970
BGIOSGA007643
Oryza indica
BGIOSGA007643
N
0.967
LPERR02G04880
Leersia perrieri
LPERR02G04880
N
0.967
OGLUM02G05530
Oryza glumaepatula
OGLUM02G05530
N
0.967
ORUFI02G05750
Oryza rufipogon
ORUFI02G05750
N
0.967
OPUNC02G04800
Oryza punctata
OPUNC02G04800
N
0.967
SPL4
Oryza sativa
OS02G0174100
N
0.967
ORGLA02G0051400
Oryza glaberrima
ORGLA02G0051400
N
0.967
OMERI02G06420
Oryza meridionalis
OMERI02G06420
N
0.967
ONIVA02G05960
Oryza nivara
ONIVA02G05960
N
0.967
OB02G14840
Oryza brachyantha
OB02G14840
N
0.966
GSMUA_Achr3G05360_001
Musa acuminata
GSMUA_Achr3G05360_001
N
0.964
GSMUA_Achr3G27750_001
Musa acuminata
GSMUA_Achr3G27750_001
N
0.964
GSMUA_Achr10G02970_001
Musa acuminata
GSMUA_Achr10G02970_001
N
0.964
GSMUA_Achr9G14160_001
Musa acuminata
GSMUA_Achr9G14160_001
N
0.964
Carubv10026434m.g
Capsella rubella
Carubv10026434m.g
N
0.963
Cagra.8694s0002
Capsella grandiflora
Cagra.8694s0002
N
0.963
Bo7g065290
Brassica oleracea
Bo7g065290
N
0.963
Thhalv10003215m.g
Eutrema salsugineum
Thhalv10003215m.g
N
0.961
SPL2
Arabidopsis lyrata
scaffold_800740.1
N
0.961
SPL2
Arabidopsis thaliana
AT5G43270
N
0.961
Bo9g058970
Brassica oleracea
Bo9g058970
N
0.961
Bra027478
Brassica rapa
Bra027478
N
0.961
Bra033671
Brassica rapa
Bra033671
N
0.961
GSMUA_Achr5G22630_001
Musa acuminata
GSMUA_Achr5G22630_001
N
0.959
PGSC0003DMG400026736
Solanum tuberosum
PGSC0003DMG400026736
I
0.958
Bostr.3148s0148
Boechera stricta
Bostr.3148s0148
N
0.958
Ca_11356
Cicer arietinum
Ca_11356
I
0.957
GSMUA_Achr8G23820_001
Musa acuminata
GSMUA_Achr8G23820_001
N
0.957
GRMZM2G126827
Zea mays
GRMZM2G126827
N
0.954
Sb04g004940
Sorghum bicolor
Sb04g004940
N
0.954
GRMZM2G156621
Zea mays
GRMZM2G156621
N
0.954
Si017749m.g
Setaria italica
Si017749m.g
N
0.954
Pavir.Ab00499
Panicum virgatum
Pavir.Ab00499
N
0.953
Pavir.J20730
Panicum virgatum
Pavir.J20730
N
0.953
GSMUA_Achr5G21990_001
Musa acuminata
GSMUA_Achr5G21990_001
N
0.953
GRMZM2G163813
Zea mays
GRMZM2G163813
N
0.953
MLOC_62426
Hordeum vulgare
MLOC_62426
N
0.952
LPERR02G02980
Leersia perrieri
LPERR02G02980
N
0.952
OS02G0139400
Oryza sativa
OS02G0139400
N
0.950
ONIVA02G03070
Oryza nivara
ONIVA02G03070
N
0.950
ORGLA02G0030600
Oryza glaberrima
ORGLA02G0030600
N
0.950
ORUFI02G03180
Oryza rufipogon
ORUFI02G03180
N
0.950
OBART02G03260
Oryza barthii
OBART02G03260
N
0.950
OB02G12930
Oryza brachyantha
OB02G12930
N
0.950
BRADI3G03510
Brachypodium distachyon
BRADI3G03510
N
0.950
OLONG_025693
Oryza longistaminata
OLONG_025693
N
0.950
SPL3
Oryza indica
BGIOSGA007499
N
0.950
OMERI02G03900
Oryza meridionalis
OMERI02G03900
N
0.950
OPUNC02G02570
Oryza punctata
OPUNC02G02570
N
0.948
GRMZM2G097275
Zea mays
GRMZM2G097275
N
0.947
GSMUA_Achr6G36010_001
Musa acuminata
GSMUA_Achr6G36010_001
N
0.946
MLOC_11199
Hordeum vulgare
MLOC_11199
N
0.946
cassava6540.valid.m1
Manihot esculenta
cassava6540.valid.m1
N
0.945
F775_31908
Aegilops tauschii
F775_31908
N
0.945
TCM_008772
Theobroma cacao
TCM_008772
N
0.945
Traes_6DS_7B1596298
Triticum aestivum
Traes_6DS_7B1596298
N
0.945
VIT_01s0010g03710
Vitis vinifera
VIT_01s0010g03710
I
0.945
ONIVA06G29160
Oryza nivara
ONIVA06G29160
N
0.944
SPL12
Oryza indica
BGIOSGA020577
N
0.944
OMERI06G26720
Oryza meridionalis
OMERI06G26720
N
0.944
OBART06G26610
Oryza barthii
OBART06G26610
N
0.944
OGLUM06G28030
Oryza glumaepatula
OGLUM06G28030
N
0.944
ORUFI06G28570
Oryza rufipogon
ORUFI06G28570
N
0.944
OLONG_012160
Oryza longistaminata
OLONG_012160
N
0.944
OPUNC06G24320
Oryza punctata
OPUNC06G24320
N
0.944
SPL12
Oryza sativa
OS06G0703500
N
0.944
ORGLA06G0222300
Oryza glaberrima
ORGLA06G0222300
N
0.944
SapurV1A.1271s0060
Salix purpurea
SapurV1A.1271s0060
I
0.943
POPTR_0001s13890
Populus trichocarpa
POPTR_0001s13890
I
0.943
POPTR_0003s17120
Populus trichocarpa
POPTR_0003s17120
I
0.943
SapurV1A.0056s0240
Salix purpurea
SapurV1A.0056s0240
I
0.943
LPERR06G22200
Leersia perrieri
LPERR06G22200
N
0.943
GRMZM2G065451
Zea mays
GRMZM2G065451
N
0.942
TRIUR3_09477
Triticum urartu
TRIUR3_09477
N
0.941
Traes_6BS_F50663DF7
Triticum aestivum
Traes_6BS_F50663DF7
N
0.941
Traes_6AS_99C6A3B0B
Triticum aestivum
Traes_6AS_99C6A3B0B
N
0.941
29929.m004641
Ricinus communis
29929.m004641
I
0.940
PK16953.1
Cannabis sativa
PK16953.1
N
0.940
evm.TU.supercontig_43.66
Carica papaya
evm.TU.supercontig_43.66
I
0.940
PRUPE_ppa005013mg
Prunus persica
PRUPE_ppa005013mg
N
0.939
Gorai.002G182700
Gossypium raimondii
Gorai.002G182700
N
0.938
Pm007020
Prunus mume
Pm007020
N
0.937
LjSGA_032871.1
Lotus japonicus
LjSGA_032871.1
N
0.937
MDP0000155354
Malus domestica
MDP0000155354
N
0.933
cassava12059.valid.m1
Manihot esculenta
cassava12059.valid.m1
N
0.933
OB06G34330
Oryza brachyantha
OB06G34330
N
0.932
Sb04g003175
Sorghum bicolor
Sb04g003175
N
0.932
Ciclev10031391m.g
Citrus clementina
Ciclev10031391m.g
N
0.931
orange1.1g011640m.g
Citrus sinensis
orange1.1g011640m.g
N
0.931
BRADI3G05510
Brachypodium distachyon
BRADI3G05510
I
0.929
mgf019346m
Mimulus guttatus
mgf019346m
I
0.927
Si017520m.g
Setaria italica
Si017520m.g
N
0.925
Pavir.Aa03225
Panicum virgatum
Pavir.Aa03225
N
0.924
Pavir.Ab00358
Panicum virgatum
Pavir.Ab00358
N
0.924
mgf010397m
Mimulus guttatus
mgf010397m
N
0.922
Aquca_018_00218
Aquilegia coerulea
Aquca_018_00218
I
0.922
Eucgr.B03500
Eucalyptus grandis
Eucgr.B03500
I
0.919
LjSGA_017270.1
Lotus japonicus
LjSGA_017270.1
N
0.918
MTR_3g085180
Medicago truncatula
MTR_3g085180
N
0.917
Lus10006411.g
Linum usitatissimum
Lus10006411.g
I
0.914
GLYMA11G36980
Glycine max
GLYMA11G36980
N
0.911
PGSC0003DMG400034310
Solanum tuberosum
PGSC0003DMG400034310
N
0.911
Lus10021614.g
Linum usitatissimum
Lus10021614.g
N
0.890
Lus10011356.g
Linum usitatissimum
Lus10011356.g
I
0.890
Solyc05g015510.2
Solanum lycopersicum
Solyc05g015510.2
N
0.886