GSMUA_Achr4G24610_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G24610_001 T322656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.950 0.853
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.897 0.760
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.897 0.760
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P24610_001 SBP 127 201

Links

Other SBP family TFs
Other Musa acuminata TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.976
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.974
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.971
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.956
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.952
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.950
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.950
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.950
Bra033221 Brassica rapa Bra033221 I 0.950
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.950
SPL8 Arabidopsis thaliana AT1G02065 D 0.950
Bo5g001290 Brassica oleracea Bo5g001290 I 0.950
Bo8g118210 Brassica oleracea Bo8g118210 I 0.950
Bra032662 Brassica rapa Bra032662 I 0.950
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.949
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.949
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.947
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.947
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.947
TCM_005622 Theobroma cacao TCM_005622 I 0.947
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.947
30174.m008803 Ricinus communis 30174.m008803 I 0.947
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.947
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.947
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.947
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.947
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.947
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.947
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.947
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.946
Ca_18942 Cicer arietinum Ca_18942 I 0.946
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.946
PK25779.1 Cannabis sativa PK25779.1 I 0.946
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.946
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.946
Cla006776 Citrullus lanatus Cla006776 I 0.946
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.946
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.946
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.946
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.946
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.945
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.945
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.945
MDP0000803116 Malus domestica MDP0000803116 I 0.945
mgf016085m Mimulus guttatus mgf016085m I 0.945
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.944
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.934
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.934
Si017338m.g Setaria italica Si017338m.g I 0.934
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.934
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.934
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.933
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.933
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.933
SPL5 Oryza sativa OS02G0177300 I 0.929
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.929
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.929
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.929
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.928
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.928
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.927
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.925
cassava13944.valid.m1 Manihot esculenta cassava13944.valid.m1 I 0.922
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.920
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.920
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.920
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.920
OB06G31100 Oryza brachyantha OB06G31100 I 0.920
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.920
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.920
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.920
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.920
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.920
MLOC_326 Hordeum vulgare MLOC_326 I 0.920
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.920
SPL10 Oryza sativa OS06G0659100 I 0.920
PRUPE_ppa008560mg Prunus persica PRUPE_ppa008560mg I 0.920
Si006559m.g Setaria italica Si006559m.g I 0.920
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.920
SPL10 Oryza indica BGIOSGA023408 I 0.920
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.920
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.920
Pm017777 Prunus mume Pm017777 I 0.920
Cucsa.120620 Cucumis sativus Cucsa.120620 I 0.918
Cla020006 Citrullus lanatus Cla020006 I 0.918
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.916
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.913
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.913
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.913
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.913
fgenesh1_pg.scaffold_23000047 Physcomitrella patens fgenesh1_pg.scaffold_23000047 I 0.911
OB02G15090 Oryza brachyantha OB02G15090 I 0.907
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.907
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.907
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.906
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.906
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.897
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.897
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.897
OBART06G23500 Oryza barthii OBART06G23500 I 0.890
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.889
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.888
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.888
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.888