OGLUM06G28030 (Oryza glumaepatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OGLUM06G28030 T322797_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G28030.1 SBP 180 254
OGLUM06G28030.2 SBP 180 254

Links

Other SBP family TFs
Other Oryza glumaepatula TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31908 Aegilops tauschii F775_31908 N 0.955
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.900
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.893
SPL2 Arabidopsis thaliana AT5G43270 N 0.893
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.943
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.946
Bo9g058970 Brassica oleracea Bo9g058970 N 0.893
Bo7g065290 Brassica oleracea Bo7g065290 N 0.897
Bra027478 Brassica rapa Bra027478 N 0.893
Bra033671 Brassica rapa Bra033671 N 0.893
PK16953.1 Cannabis sativa PK16953.1 N 0.913
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.896
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.896
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.926
Ca_11356 Cicer arietinum Ca_11356 I 0.922
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.906
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.906
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.897
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.893
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.930
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.925
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.956
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.964
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.940
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.981
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.952
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.892
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.928
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.908
MDP0000155354 Malus domestica MDP0000155354 N 0.903
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.919
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.945
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.907
mgf010397m Mimulus guttatus mgf010397m N 0.920
mgf019346m Mimulus guttatus mgf019346m I 0.902
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.938
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.942
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.957
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.933
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.944
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.938
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.967
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.951
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.961
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.957
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.957
OBART06G26610 Oryza barthii OBART06G26610 N 0.982
OBART02G03260 Oryza barthii OBART02G03260 N 0.938
OB06G34330 Oryza brachyantha OB06G34330 N 0.977
OB02G12930 Oryza brachyantha OB02G12930 N 0.951
OB02G14840 Oryza brachyantha OB02G14840 N 0.948
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.952
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.938
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.982
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.952
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.952
SPL12 Oryza indica BGIOSGA020577 N 0.982
SPL3 Oryza indica BGIOSGA007499 N 0.938
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.982
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.938
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.952
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.982
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.938
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.938
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.982
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.930
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.935
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.952
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.981
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.952
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.938
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.982
SPL12 Oryza sativa OS06G0703500 N 0.982
SPL4 Oryza sativa OS02G0174100 N 0.952
OS02G0139400 Oryza sativa OS02G0139400 N 0.938
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.974
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.974
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.961
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.961
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.927
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.927
Pm007020 Prunus mume Pm007020 N 0.908
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.911
29929.m004641 Ricinus communis 29929.m004641 I 0.908
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.927
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.927
Si017520m.g Setaria italica Si017520m.g N 0.974
Si006472m.g Setaria italica Si006472m.g N 0.928
Si017749m.g Setaria italica Si017749m.g N 0.962
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.893
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.915
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.965
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.967
Sb10g029190 Sorghum bicolor Sb10g029190 N 0.957
TCM_008772 Theobroma cacao TCM_008772 N 0.934
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.952
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.952
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.960
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.960
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.955
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.952
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.930
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.965
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.965
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.951
GRMZM2G414805 Zea mays GRMZM2G414805 N 0.935
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.957
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.964