OMERI11G11920 (Oryza meridionalis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OMERI11G11920 T322832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.930 0.739
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI11G11920.1 SBP 35 85
OMERI11G11920.1 SBP 80 135
OMERI11G11920.2 SBP 35 103

Links

Other SBP family TFs
Other Oryza meridionalis TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29929.m004627 Ricinus communis 29929.m004627 I 0.937
30138.m003942 Ricinus communis 30138.m003942 I 0.957
30174.m009082 Ricinus communis 30174.m009082 I 0.958
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.928
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.951
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.955
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.943
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.955
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.909
Bo2g062840 Brassica oleracea Bo2g062840 I 0.926
Bo3g024180 Brassica oleracea Bo3g024180 I 0.930
Bo3g042890 Brassica oleracea Bo3g042890 I 0.956
Bo6g108620 Brassica oleracea Bo6g108620 N 0.895
Bo9g097630 Brassica oleracea Bo9g097630 I 0.932
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.929
Bra004363 Brassica rapa Bra004363 N 0.895
Bra022766 Brassica rapa Bra022766 I 0.928
Bra038324 Brassica rapa Bra038324 I 0.928
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.935
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.949
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.915
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.935
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.930
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.918
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.918
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.930
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.888
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.914
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.958
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.937
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.952
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.937
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.954
Ca_01426 Cicer arietinum Ca_01426 I 0.926
Ca_05711 Cicer arietinum Ca_05711 I 0.929
Ca_19449 Cicer arietinum Ca_19449 I 0.960
Ca_24655 Cicer arietinum Ca_24655 I 0.935
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.961
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.936
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.935
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.936
Cla001541 Citrullus lanatus Cla001541 I 0.964
Cla002666 Citrullus lanatus Cla002666 I 0.931
Cla004156 Citrullus lanatus Cla004156 I 0.888
Cla018827 Citrullus lanatus Cla018827 I 0.959
Cla019331 Citrullus lanatus Cla019331 I 0.958
Cla019579 Citrullus lanatus Cla019579 I 0.922
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.888
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.958
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.928
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.960
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.964
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.931
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.971
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.968
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I 0.895
Eucgr.K02545 Eucalyptus grandis Eucgr.K02545 I 0.913
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.932
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.934
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.957
F775_02791 Aegilops tauschii F775_02791 I 0.927
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.946
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.891
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.940
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.931
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.971
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.960
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.955
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.955
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.960
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.926
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.928
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.926
GLYMA06G22545 Glycine max GLYMA06G22545 N 0.891
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.937
GLYMA11G08905 Glycine max GLYMA11G08905 N 0.891
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.886
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.916
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.960
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.918
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.893
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.949
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.971
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.937
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.886
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.942
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.903
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.949
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.935
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.891
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.923
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.928
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.938
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.956
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.927
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.935
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.940
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.946
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.937
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.941
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.939
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.961
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.959
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.943
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.961
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.943
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.944
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.950
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.957
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.900
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.925
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.892
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.972
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.943
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.902
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.953
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.911
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.888
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.888
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.936
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.955
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.942
MDP0000119458 Malus domestica MDP0000119458 I 0.961
MDP0000142582 Malus domestica MDP0000142582 N 0.910
MDP0000146640 Malus domestica MDP0000146640 I 0.959
MDP0000171877 Malus domestica MDP0000171877 I 0.935
MDP0000193702 Malus domestica MDP0000193702 I 0.961
MDP0000246046 Malus domestica MDP0000246046 I 0.935
MDP0000589558 Malus domestica MDP0000589558 I 0.937
MDP0000778465 Malus domestica MDP0000778465 I 0.959
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.934
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.956
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.927
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.960
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.926
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.960
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.910
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.945
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.929
OB04G27960 Oryza brachyantha OB04G27960 I 0.909
OBART01G42150 Oryza barthii OBART01G42150 I 0.955
OBART04G20940 Oryza barthii OBART04G20940 I 0.909
OBART09G15750 Oryza barthii OBART09G15750 I 0.892
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.955
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.909
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.934
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.892
OGLUM11G13820 Oryza glumaepatula OGLUM11G13820 N 0.913
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.955
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.909
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.934
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.955
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.909
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.917
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.892
ONIVA11G13750 Oryza nivara ONIVA11G13750 N 0.909
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.955
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.909
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.931
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.961
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.936
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.935
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.936
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.955
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.909
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.928
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.981
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.955
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.909
OS01G0922600 Oryza sativa OS01G0922600 I 0.955
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.961
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.973
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.902
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.961
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.892
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I 0.889
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.957
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.973
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.961
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.961
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.960
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.952
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.960
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.920
PK02140.1 Cannabis sativa PK02140.1 I 0.928
PK03565.1 Cannabis sativa PK03565.1 I 0.910
PK17790.1 Cannabis sativa PK17790.1 I 0.954
PK19500.1 Cannabis sativa PK19500.1 I 0.944
Pm014154 Prunus mume Pm014154 I 0.896
Pm024528 Prunus mume Pm024528 I 0.931
Pm025028 Prunus mume Pm025028 I 0.972
Pm030597 Prunus mume Pm030597 I 0.942
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.913
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.916
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.955
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.958
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.931
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.954
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.932
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.971
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.931
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.896
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.942
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.895
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.958
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.927
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.921
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.941
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.924
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.925
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.913
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.935
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.957
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.967
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.887
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.893
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.928
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N 0.900
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N 0.900
Si001804m.g Setaria italica Si001804m.g I 0.973
Si010262m.g Setaria italica Si010262m.g I 0.929
Si013747m.g Setaria italica Si013747m.g N 0.961
Si026656m.g Setaria italica Si026656m.g I 0.957
Si032170m.g Setaria italica Si032170m.g I 0.894
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.960
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.920
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.960
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.952
SPL13A Arabidopsis thaliana AT5G50570 I 0.930
SPL13A Arabidopsis thaliana AT5G50670 D 0.930
SPL16 Oryza sativa OS08G0531600 I 0.934
SPL18 Oryza sativa OS09G0507100 I 0.892
SPL19 Oryza sativa OS11G0496600 I 0.981
SPL6 Arabidopsis thaliana AT1G69170 I 0.945
SPL7 Oryza sativa OS04G0551500 I 0.909
TCM_008671 Theobroma cacao TCM_008671 I 0.942
TCM_011483 Theobroma cacao TCM_011483 I 0.970
TCM_014330 Theobroma cacao TCM_014330 I 0.958
TCM_014668 Theobroma cacao TCM_014668 I 0.934
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.932
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.918
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.927
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I 0.911
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.927
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.934
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.934
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.940
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.956
VIT_04s0210g00170 Vitis vinifera VIT_04s0210g00170 N 0.891
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.925
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.958