OPUNC02G05050 (Oryza punctata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OPUNC02G05050 T322856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.909 0.773
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.897 0.760
fgenesh1_pg.scaffold_194000034
M02480_2.00
Physcomitrella patens
NNNGTACNNN

NNNGTACNNN
PBM
Weirauch et al.(2014)
pTH8580
0.895 0.760
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC02G05050.1 SBP 214 288

Links

Other SBP family TFs
Other Oryza punctata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OB02G15090 Oryza brachyantha OB02G15090 I 0.984
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.984
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.982
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.982
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.982
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.980
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.980
MLOC_326 Hordeum vulgare MLOC_326 I 0.980
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.980
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.980
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.980
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.980
Si006559m.g Setaria italica Si006559m.g I 0.980
SPL10 Oryza sativa OS06G0659100 I 0.980
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.980
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.980
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.980
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.980
OB06G31100 Oryza brachyantha OB06G31100 I 0.980
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.980
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.980
SPL10 Oryza indica BGIOSGA023408 I 0.980
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.979
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.979
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.979
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.979
SPL5 Oryza sativa OS02G0177300 I 0.979
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.975
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.973
Si017338m.g Setaria italica Si017338m.g I 0.973
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.973
OBART06G23500 Oryza barthii OBART06G23500 I 0.970
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.968
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.965
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.963
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.960
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.953
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.953
F775_00761 Aegilops tauschii F775_00761 I 0.949
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.945
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.937
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.937
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.933
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.932
29983.m003158 Ricinus communis 29983.m003158 I 0.930
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.929
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.927
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.926
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.926
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.925
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.925
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.924
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.924
Si022315m.g Setaria italica Si022315m.g I 0.924
SPL8 Oryza sativa OS04G0656500 I 0.924
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.924
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.924
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.924
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.924
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.924
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.924
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.924
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.924
OB04G34990 Oryza brachyantha OB04G34990 I 0.924
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.924
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.924
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.924
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.924
OBART04G27990 Oryza barthii OBART04G27990 I 0.924
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.924
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.924
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.921
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.921
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.917
Cla020006 Citrullus lanatus Cla020006 I 0.915
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.915
mgf016085m Mimulus guttatus mgf016085m I 0.915
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.913
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.912
Ca_18942 Cicer arietinum Ca_18942 I 0.911
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.911
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.911
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.911
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.911
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.911
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.911
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.911
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.911
30174.m008803 Ricinus communis 30174.m008803 I 0.911
PK25779.1 Cannabis sativa PK25779.1 I 0.911
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.911
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.911
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.911
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.911
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.911
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.911
TCM_005622 Theobroma cacao TCM_005622 I 0.911
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.911
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.911
Traes_7DL_2D8356B05 Triticum aestivum Traes_7DL_2D8356B05 N 0.910
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.910
F775_20508 Aegilops tauschii F775_20508 N 0.910
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.909
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.909
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.909
SPL8 Arabidopsis thaliana AT1G02065 D 0.909
Bo5g001290 Brassica oleracea Bo5g001290 I 0.909
Bo8g118210 Brassica oleracea Bo8g118210 I 0.909
Bra033221 Brassica rapa Bra033221 I 0.909
MDP0000803116 Malus domestica MDP0000803116 I 0.909
Bra032662 Brassica rapa Bra032662 I 0.909
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.909
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.909
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.909
Cla006776 Citrullus lanatus Cla006776 I 0.908
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.908
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.908
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.907
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.904
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.904
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.902
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.901
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.900
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.900
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.897
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.896
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.895
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.893
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.892
Pm011381 Prunus mume Pm011381 I 0.891
MDP0000158607 Malus domestica MDP0000158607 I 0.891
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.891
Ca_16243 Cicer arietinum Ca_16243 I 0.887
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.887
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.887
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.887
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.887
Cla023735 Citrullus lanatus Cla023735 I 0.886
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.886
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.886