PRUPE_ppa000792mg (Prunus persica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 PRUPE_ppa000792mg T322975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.981 0.893
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.975 0.827
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.975 0.827
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.975 0.827
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG

CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.972 0.840
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.970 0.827
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.970 0.827
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.970 0.827
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.970 0.827
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.969 0.773
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.969 0.827
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.963 0.827
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.947 0.707
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.944 0.707
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.937 0.680
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.937 0.680
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.937 0.680
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA

TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.935 0.693
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN

NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.935 0.693
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH

DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.935 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ26579 SBP 143 217

Links

Other SBP family TFs
Other Prunus persica TFs

494 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.000
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.000
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.000
EOMES Anolis carolinensis ENSACAG00000014201 I 0.000
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.000
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.000
TBR1 Bos taurus ENSBTAG00000021692 I 0.000
TBR1 Canis familiaris ENSCAFG00000009984 I 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.000
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.000
tbr1b Danio rerio ENSDARG00000004712 I 0.000
tbr1a Danio rerio ENSDARG00000076259 I 0.000
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.000
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.000
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.000
TBR1 Felis catus ENSFCAG00000025073 I 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.000
EOMES Gallus gallus ENSGALG00000027247 I 0.000
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.000
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.000
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.000
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.000
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.000
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.000
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.000
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.000
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.000
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.000
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.000
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.000
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.000
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.000
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.000
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.000
tbr1b Oryzias latipes ENSORLG00000016828 I 0.000
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.000
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.000
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.000
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.000
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.000
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.000
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.000
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.000
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.000
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.000
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.000
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.000
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.000
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.000
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.000
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.000
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.000
LotgiG129911 Lottia gigantea LotgiG129911 I 0.000
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.000
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.000
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.000
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.000
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.000
eomes Xenopus tropicalis XB-GENE-479769 I 0.000
eomes.S Xenopus laevis XB-GENE-6487182 I 0.000
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.000